RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RAB17Q9H0T7 212 aa14.99□□□□□ -0.01
NUP50-219ENST00000497960 FBXO8Q9NRD0 319 aa14.99□□□□□ -0.01
NUP50-219ENST00000497960 ATRXP46100 2492 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 IGLV3-16A0A075B6K0 115 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 C17orf113A0A1B0GUU1 675 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 TCRBV7S3A2A0A539 114 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 ATXN7O15265 892 aaPredicted RBP14.98□□□□□ -0.01
NUP50-219ENST00000497960 SGTAO43765 313 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 ADRA1DP25100 572 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 PSMA3P25788 255 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 LEPRP48357 1165 aaKnown RBP14.98□□□□□ -0.01
NUP50-219ENST00000497960 KRT33BQ14525 404 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 RNASEH2BQ5TBB1 312 aaKnown RBP14.98□□□□□ -0.01
NUP50-219ENST00000497960 ANKRD22Q5VYY1 191 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 IRGCQ6NXR0 463 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 PCGF5Q86SE9 256 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 LSM14AQ8ND56 463 aaKnown RBP14.98□□□□□ -0.01
NUP50-219ENST00000497960 GPR150Q8NGU9 434 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 ZFPM2Q8WW38 1151 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 PMEPA1Q969W9 287 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 SNF8Q96H20 258 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 BBC3Q96PG8 261 aaPredicted RBP14.98□□□□□ -0.01
NUP50-219ENST00000497960 INSM2Q96T92 566 aaPredicted RBP14.98□□□□□ -0.01
NUP50-219ENST00000497960 TTC1Q99614 292 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 DPH5Q9H2P9 285 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 CASS4Q9NQ75 786 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 EPHA6Q9UF33 1036 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 UTP11Q9Y3A2 253 aaKnown RBP14.98□□□□□ -0.01
NUP50-219ENST00000497960 HEBP2Q9Y5Z4 205 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 CFAP20Q9Y6A4 193 aaKnown RBP14.98□□□□□ -0.01
NUP50-219ENST00000497960 COLEC10Q9Y6Z7 277 aa14.98□□□□□ -0.01
NUP50-219ENST00000497960 IGSF10Q6WRI0 2623 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 GOLGA8MH3BSY2 632 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 ERVH48-1M5A8F1 160 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 AP3B1O00203 1094 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 NDC80O14777 642 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 POLR1CO15160 346 aaPredicted RBP14.97□□□□□ -0.01
NUP50-219ENST00000497960 AP2A2O94973 939 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 GSTM1P09488 218 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 NDUFS1P28331 727 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 GRIA1P42261 906 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 MAGEA6P43360 314 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 SEPHS1P49903 392 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 ARSDP51689 593 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 SESN2P58004 480 aaPredicted RBP14.97□□□□□ -0.01
NUP50-219ENST00000497960 GSTM4Q03013 218 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 FOXM1Q08050 763 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 ITIH4Q14624 930 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 DBN1Q16643 649 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 TAF1BQ53T94 588 aaPredicted RBP14.97□□□□□ -0.01
NUP50-219ENST00000497960 TSTD2Q5T7W7 516 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 CACHD1Q5VU97 1274 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 NLRP9Q7RTR0 991 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 PRSS42Q7Z5A4 293 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 VASH2Q86V25 355 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 HOOK3Q86VS8 718 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 PIANPQ8IYJ0 282 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 IL22RA1Q8N6P7 574 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 ZSCAN1Q8NBB4 408 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 SPDYE1Q8NFV5 336 aaPredicted RBP14.97□□□□□ -0.01
NUP50-219ENST00000497960 JPH3Q8WXH2 748 aaPredicted RBP14.97□□□□□ -0.01
NUP50-219ENST00000497960 SLC39A7Q92504 469 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 RANBP9Q96S59 729 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 CTRCQ99895 268 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 RAB33BQ9H082 229 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 ZNF768Q9H5H4 540 aaKnown RBP14.97□□□□□ -0.01
NUP50-219ENST00000497960 RIMKLBQ9ULI2 386 aa14.97□□□□□ -0.01
NUP50-219ENST00000497960 CCDC162PA2VCL2 907 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 TK2O00142 265 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 QSOX1O00391 747 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 IFRD1O00458 451 aaPredicted RBP14.96□□□□□ -0.01
NUP50-219ENST00000497960 EFSO43281 561 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 SEC31AO94979 1220 aaKnown RBP14.96□□□□□ -0.01
NUP50-219ENST00000497960 PRSS56P0CW18 603 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 NSG1P42857 185 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 CALCOCO2Q13137 446 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 SDK2Q58EX2 2172 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 LYPLAL1Q5VWZ2 237 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 CAPRIN2Q6IMN6 1127 aaKnown RBP14.96□□□□□ -0.01
NUP50-219ENST00000497960 ARMC6Q6NXE6 501 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 DUS1LQ6P1R4 473 aaKnown RBP14.96□□□□□ -0.01
NUP50-219ENST00000497960 LRRC8BQ6P9F7 803 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 AFTPHQ6ULP2 937 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 FAM92BQ6ZTR7 304 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 ZNF534Q76KX8 674 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 OOSP2Q86WS3 158 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 MMGT1Q8N4V1 131 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 LILRA3Q8N6C8 439 aaPredicted RBP14.96□□□□□ -0.01
NUP50-219ENST00000497960 CLDN19Q8N6F1 224 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 NAT8LQ8N9F0 302 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 NOA1Q8NC60 698 aaKnown RBP14.96□□□□□ -0.01
NUP50-219ENST00000497960 PPHLN1Q8NEY8 458 aaKnown RBP14.96□□□□□ -0.01
NUP50-219ENST00000497960 NKD1Q969G9 470 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 HDAC10Q969S8 669 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 RMDN2Q96LZ7 410 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 ERP44Q9BS26 406 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 KIR3DX1Q9H7L2 352 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 COG4Q9H9E3 785 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 L2HGDHQ9H9P8 463 aa14.96□□□□□ -0.01
NUP50-219ENST00000497960 XAB2Q9HCS7 855 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms