RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 AGAP9Q5VTM2 703 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 UGT3A1Q6NUS8 523 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 IYDQ6PHW0 289 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 OGFOD3Q6PK18 319 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 PAQR3Q6TCH7 311 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 ABRAXAS1Q6UWZ7 409 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 CEP97Q8IW35 865 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 TRIM48Q8IWZ4 208 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 ARL14Q8N4G2 192 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 DEFB124Q8NES8 71 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 CFAP61Q8NHU2 1237 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 MAPK15Q8TD08 544 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 DCAKDQ8WVC6 231 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 INPP5DQ92835 1189 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 GLMNQ92990 594 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 ZBTB9Q96C00 473 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 CXorf40BQ96DE9 158 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 C12orf66Q96MD2 445 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 INSM2Q96T92 566 aaPredicted RBP11.64□□□□□ -0.55
CUX1-210ENST00000497815 GPR22Q99680 433 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 OR52A5Q9H2C5 316 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 CDV3Q9UKY7 258 aaKnown RBP11.64□□□□□ -0.55
CUX1-210ENST00000497815 PCOLCE2Q9UKZ9 415 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 RUVBL2Q9Y230 463 aaKnown RBP11.64□□□□□ -0.55
CUX1-210ENST00000497815 DHRS7Q9Y394 339 aa11.64□□□□□ -0.55
CUX1-210ENST00000497815 LAMA1P25391 3075 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 TDRD6O60522 2096 aaKnown RBP11.63□□□□□ -0.55
CUX1-210ENST00000497815 CACNA1EQ15878 2313 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 CPED1A4D0V7 1026 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 CCDC151A5D8V7 595 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 PHGDHO43175 533 aaKnown RBP11.63□□□□□ -0.55
CUX1-210ENST00000497815 GPC4O75487 556 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 SLCO2B1O94956 709 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 SLC2A4P14672 509 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 STMN1P16949 149 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 SKIV2L2P42285 1042 aaKnown RBP11.63□□□□□ -0.55
CUX1-210ENST00000497815 RPIAP49247 311 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 POU4F1Q01851 419 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 PLOD1Q02809 727 aaPredicted RBP11.63□□□□□ -0.55
CUX1-210ENST00000497815 IFFO1Q0D2I5 559 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 DNAJC3Q13217 504 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 KRT33BQ14525 404 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 PROX2Q3B8N5 592 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 CCDC157Q569K6 752 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 CAPRIN2Q6IMN6 1127 aaKnown RBP11.63□□□□□ -0.55
CUX1-210ENST00000497815 WASH2PQ6VEQ5 465 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 RAPH1Q70E73 1250 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 TAOK1Q7L7X3 1001 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 CMC1Q7Z7K0 106 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 PDZD3Q86UT5 571 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 ZNF761Q86XN6 746 aaPredicted RBP11.63□□□□□ -0.55
CUX1-210ENST00000497815 SLC22A15Q8IZD6 547 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 SFRP1Q8N474 314 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 MREGQ8N565 214 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 PHC3Q8NDX5 983 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 GPR156Q8NFN8 814 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 EPS8L3Q8TE67 593 aaKnown RBP11.63□□□□□ -0.55
CUX1-210ENST00000497815 EEF1AKMT1Q8WVE0 214 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 TSPAN17Q96FV3 270 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 FERD3LQ96RJ6 166 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 GPAMQ9HCL2 828 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 WASH6PQ9NQA3 447 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 LATS2Q9NRM7 1088 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 ZNF624Q9P2J8 865 aaPredicted RBP11.63□□□□□ -0.55
CUX1-210ENST00000497815 CPNE7Q9UBL6 633 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 CTNNAL1Q9UBT7 734 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 TBK1Q9UHD2 729 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 PADI4Q9UM07 663 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 PLAAQ9Y263 795 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 RNF215Q9Y6U7 377 aa11.63□□□□□ -0.55
CUX1-210ENST00000497815 LY6G6EA0A0G2JKS1 128 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 KIR2DS5A0A0G2JLQ3 304 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 A0A0G2JNG1 304 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 TLDC2A0PJX2 215 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 HMX2A2RU54 273 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 OR5K4A6NMS3 321 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 RHPN2P1A8MT19 583 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 KIR2DS3K7RE56 304 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 CBFA2T3O75081 653 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 KRT38O76015 456 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 VIPP01282 170 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 MTHFD1P11586 935 aaKnown RBP11.62□□□□□ -0.55
CUX1-210ENST00000497815 GMPRP36959 345 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 SLC19A1P41440 591 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 PPM1FP49593 454 aaPredicted RBP11.62□□□□□ -0.55
CUX1-210ENST00000497815 SERPINB9P50453 376 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 HHEXQ03014 270 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 ILF2Q12905 390 aaKnown RBP11.62□□□□□ -0.55
CUX1-210ENST00000497815 KIR2DS5Q14953 304 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 RSPO4Q2I0M5 234 aaPredicted RBP11.62□□□□□ -0.55
CUX1-210ENST00000497815 GUSBP11Q6P575 273 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 TMEM207Q6UWW9 146 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 PIWIL4Q7Z3Z4 852 aaKnown RBP11.62□□□□□ -0.55
CUX1-210ENST00000497815 PIP4P1Q86T03 277 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 SLC9B2Q86UD5 537 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 FAM181AQ8N9Y4 354 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 JPH3Q8WXH2 748 aaPredicted RBP11.62□□□□□ -0.55
CUX1-210ENST00000497815 TFGQ92734 400 aaPredicted RBP11.62□□□□□ -0.55
CUX1-210ENST00000497815 LINGO1Q96FE5 620 aa11.62□□□□□ -0.55
CUX1-210ENST00000497815 DHRS4Q9BTZ2 278 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms