RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ACSL5Q9ULC5 683 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 VWA7Q9Y334 891 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 GOLGA4Q13439 2230 aaKnown RBP19.64■□□□□ 0.73
CTSD-206ENST00000497544 APC2O95996 2303 aa19.64■□□□□ 0.73
CTSD-206ENST00000497544 EXOC1LA0A1B0GW35 172 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 PDZK1P1A8MUH7 402 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 LIN7AO14910 233 aaPredicted RBP19.63■□□□□ 0.73
CTSD-206ENST00000497544 FLRT2O43155 660 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 C1QL1O75973 258 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 PLA2G2AP14555 144 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 HSD17B3P37058 310 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 MSH2P43246 934 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 PLOD1Q02809 727 aaPredicted RBP19.63■□□□□ 0.73
CTSD-206ENST00000497544 BOP1Q14137 746 aaKnown RBP19.63■□□□□ 0.73
CTSD-206ENST00000497544 TMED2Q15363 201 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 SYTL3Q4VX76 610 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 RBM20Q5T481 1227 aaKnown RBP19.63■□□□□ 0.73
CTSD-206ENST00000497544 HECTD2Q5U5R9 776 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 NAPRTQ6XQN6 538 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 DBX2Q6ZNG2 339 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 EID2Q8N6I1 236 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 ZDHHC1Q8WTX9 485 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 ASZ1Q8WWH4 475 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 GLMNQ92990 594 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 TMEM159Q96B96 161 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 FAM136AQ96C01 138 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 VPS39Q96JC1 886 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 ELMO2Q96JJ3 720 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 COG4Q9H9E3 785 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 LATS2Q9NRM7 1088 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 TAS2R13Q9NYV9 303 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 GULP1Q9UBP9 304 aa19.63■□□□□ 0.73
CTSD-206ENST00000497544 FAM95CA0A1B0GW59 222 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 CCDC151A5D8V7 595 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 FAM155BO75949 473 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 CD59P13987 128 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 SLC2A4P14672 509 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 SAT1P21673 171 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 RPL10P27635 214 aaKnown RBP19.62■□□□□ 0.73
CTSD-206ENST00000497544 AOAHP28039 575 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 SKIV2L2P42285 1042 aaKnown RBP19.62■□□□□ 0.73
CTSD-206ENST00000497544 GRK6P43250 576 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 SLC12A2P55011 1212 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 HSPA14Q0VDF9 509 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 RPA4Q13156 261 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 SEPT7Q16181 437 aaKnown RBP19.62■□□□□ 0.73
CTSD-206ENST00000497544 FAM83HQ6ZRV2 1179 aaPredicted RBP19.62■□□□□ 0.73
CTSD-206ENST00000497544 CHCHD4Q8N4Q1 142 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 LILRA3Q8N6C8 439 aaPredicted RBP19.62■□□□□ 0.73
CTSD-206ENST00000497544 OR4C6Q8NH72 309 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 RHBDD1Q8TEB9 315 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 SLC44A1Q8WWI5 657 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 KCNJ9Q92806 393 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 PRDM8Q9NQV8 689 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 SIRPGQ9P1W8 387 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 TBC1D29Q9UFV1 150 aa19.62■□□□□ 0.73
CTSD-206ENST00000497544 MTO1Q9Y2Z2 717 aaKnown RBP19.62■□□□□ 0.73
CTSD-206ENST00000497544 TRBV23OR9-2A0A075B6M9 112 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 OR5K4A6NMS3 321 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 B4DGG1 531 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 GIMD1P0DJR0 217 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 HALP42357 657 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 LIMK2P53671 638 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 SIM1P81133 766 aaPredicted RBP19.61■□□□□ 0.73
CTSD-206ENST00000497544 PLEKHS1Q5SXH7 462 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 C6orf132Q5T0Z8 1188 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 ABRAXAS1Q6UWZ7 409 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 WASH2PQ6VEQ5 465 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 INPP5DQ92835 1189 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 PAFAH2Q99487 392 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 GPR21Q99679 349 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 MCMBPQ9BTE3 642 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 WASH6PQ9NQA3 447 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 GALPQ9UBC7 116 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 TRMT6Q9UJA5 497 aaKnown RBP19.61■□□□□ 0.73
CTSD-206ENST00000497544 PSMD13Q9UNM6 376 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 DHRS7Q9Y394 339 aa19.61■□□□□ 0.73
CTSD-206ENST00000497544 SLC5A10A0PJK1 596 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 PRR19A6NJB7 356 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 TRIM38O00635 465 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 SIGLEC6O43699 453 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 SH3BP5O60239 455 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 SLC35G4P0C7Q5 338 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 F3P13726 295 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 PREPP48147 710 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 SERPINB9P50453 376 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 CDKN2DP55273 166 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 POU4F1Q01851 419 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 PDAP1Q13442 181 aaKnown RBP19.6■□□□□ 0.73
CTSD-206ENST00000497544 TTLL9Q3SXZ7 439 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 ZNF658BQ4V348 819 aaPredicted RBP19.6■□□□□ 0.73
CTSD-206ENST00000497544 LGSNQ5TDP6 509 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 AGAP9Q5VTM2 703 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 ZCCHC8Q6NZY4 707 aaKnown RBP19.6■□□□□ 0.73
CTSD-206ENST00000497544 OGFOD3Q6PK18 319 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 MREGQ8N565 214 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 ZBTB2Q8N680 514 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 SIDT2Q8NBJ9 832 aaKnown RBP19.6■□□□□ 0.73
CTSD-206ENST00000497544 WWP1Q9H0M0 922 aa19.6■□□□□ 0.73
CTSD-206ENST00000497544 SLC32A1Q9H598 525 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms