RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 RHOBTB1O94844 696 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 TRBC1P01850 177 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 FUCA1P04066 466 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 NTRK1P04629 796 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 VIMP08670 466 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 C1SP09871 688 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 BPIP17213 487 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 LHCGRP22888 699 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 FOXN2P32314 431 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 MDH1P40925 334 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 CSNK1DP48730 415 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 SERPINB8P50452 374 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 POLR2LP62875 67 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 NAB1Q13506 487 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 LAMB3Q13751 1172 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 UGP2Q16851 508 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 HNRNPA1L2Q32P51 320 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 ZNF805Q5CZA5 627 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 C9orf64Q5T6V5 341 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 N4BP2L1Q5TBK1 243 aaPredicted RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 HECTD2Q5U5R9 776 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 SDE2Q6IQ49 451 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 FSTL4Q6MZW2 842 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 ERAP2Q6P179 960 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 LVRNQ6Q4G3 990 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 VHLLQ6RSH7 139 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 AFTPHQ6ULP2 937 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 NAPRTQ6XQN6 538 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 CDHR3Q6ZTQ4 885 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 TPRG1Q6ZUI0 275 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 USP45Q70EL2 814 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 PARS2Q7L3T8 475 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 DET1Q7L5Y6 550 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 NLRP9Q7RTR0 991 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 HSD11B1LQ7Z5J1 315 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 KIAA0907Q7Z7F0 614 aaPredicted RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 PIM3Q86V86 326 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 ZC3HC1Q86WB0 502 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 TDRPQ86YL5 185 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 CEP97Q8IW35 865 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 RIBC1Q8N443 379 aaPredicted RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 BANPQ8N9N5 519 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 GPR26Q8NDV2 337 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 KCTD4Q8WVF5 259 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 SCAMP4Q969E2 229 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 ISG20Q96AZ6 181 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 EID2BQ96D98 161 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 APOPT1Q96IL0 206 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 VPS39Q96JC1 886 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 ZNF641Q96N77 438 aaPredicted RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 TSNARE1Q96NA8 513 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 TUBGCP5Q96RT8 1024 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 SRPK1Q96SB4 655 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 MYOCQ99972 504 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 MECRQ9BV79 373 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 PHF7Q9BWX1 381 aaPredicted RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 SPATA16Q9BXB7 569 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 CPEB1Q9BZB8 566 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 MFSD1Q9H3U5 465 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 ASB8Q9H765 288 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 CNOT10Q9H9A5 744 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 MAGEE1Q9HCI5 957 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 PRSS16Q9NQE7 514 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 DYRK4Q9NR20 520 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 SNX15Q9NRS6 342 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 EURLQ9NYK6 297 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 HACD3Q9P035 362 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 ZNF180Q9UJW8 692 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 TLK1Q9UKI8 766 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 CNOT11Q9UKZ1 510 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 PHTF1Q9UMS5 762 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 RUVBL2Q9Y230 463 aaKnown RBP4.72□□□□□ -1.65
CMSS1-209ENST00000497345 FAM50BQ9Y247 325 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 SIT1Q9Y3P8 196 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 BRWD1Q9NSI6 2320 aa4.72□□□□□ -1.65
CMSS1-209ENST00000497345 A0A1W2PPC1 479 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 ARNTLO00327 626 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 HGSO14964 777 aaPredicted RBP4.71□□□□□ -1.66
CMSS1-209ENST00000497345 SCAMP1O15126 338 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 INPP4BO15327 924 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 MID1O15344 667 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 SOCS5O75159 536 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 NIPSNAP2O75323 286 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 RNASEH2AO75792 299 aaKnown RBP4.71□□□□□ -1.66
CMSS1-209ENST00000497345 PCDH8O95206 1070 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 PAPSS2O95340 614 aaPredicted RBP4.71□□□□□ -1.66
CMSS1-209ENST00000497345 TRIM16O95361 564 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 ALDOAP04075 364 aaKnown RBP4.71□□□□□ -1.66
CMSS1-209ENST00000497345 C2P06681 752 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 CYP2A6P11509 494 aaPredicted RBP4.71□□□□□ -1.66
CMSS1-209ENST00000497345 STMN1P16949 149 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 CHRM3P20309 590 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 ITGALP20701 1170 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 BGNP21810 368 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 PBLDP30039 288 aaPredicted RBP4.71□□□□□ -1.66
CMSS1-209ENST00000497345 MAT2AP31153 395 aaKnown RBP4.71□□□□□ -1.66
CMSS1-209ENST00000497345 AKT1P31749 480 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 LSP1P33241 339 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 SPAM1P38567 509 aa4.71□□□□□ -1.66
CMSS1-209ENST00000497345 HADHAP40939 763 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms