RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 EEFSECP57772 596 aaKnown RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 AP5B1Q2VPB7 878 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 MTX3Q5HYI7 312 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 RABL3Q5HYI8 236 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 HMBOX1Q6NT76 420 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 CYP20A1Q6UW02 462 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 GDPD4Q6W3E5 623 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 CHST14Q8NCH0 376 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 DNAJB14Q8TBM8 379 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 CANT1Q8WVQ1 401 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 YIPF3Q9GZM5 350 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 SPHK2Q9NRA0 654 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 CCM2LQ9NUG4 571 aaPredicted RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 TDP1Q9NUW8 608 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 PKD2L2Q9NZM6 624 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 EGFL7Q9UHF1 273 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 SLCO3A1Q9UIG8 710 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 ZMYM5Q9UJ78 669 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 LZTS1Q9Y250 596 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 DHRS12A0PJE2 317 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 WASH3PC4AMC7 463 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 IFRD1O00458 451 aaPredicted RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 RGS14O43566 566 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 TIPRLO75663 272 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 RFPL2O75678 378 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 ANXA5P08758 320 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 EBLN1P0CF75 366 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 G6PDP11413 515 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 EPB42P16452 691 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 ZNF26P17031 533 aaPredicted RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 JAK1P23458 1154 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 PSMA4P25789 261 aaKnown RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 GDF5P43026 501 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 RECQLP46063 649 aaPredicted RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 POLR2LP62875 67 aaKnown RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 RPL38P63173 70 aaKnown RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 YBX1P67809 324 aaKnown RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 CDKL1Q00532 357 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 ZNF77Q15935 545 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 SMU1Q2TAY7 513 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 LRRC73Q5JTD7 316 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 CDKL4Q5MAI5 379 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 PRR23BQ6ZRT6 265 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 RFLNAQ6ZTI6 216 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 ERMP1Q7Z2K6 904 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 ADIPOR2Q86V24 386 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 PTRH1Q86Y79 214 aaKnown RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 SPPL2CQ8IUH8 684 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 HOMEZQ8IX15 550 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 KIAA2013Q8IYS2 634 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 DPP10Q8N608 796 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 PPWD1Q96BP3 646 aaKnown RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 KCTD14Q9BQ13 255 aaPredicted RBP12.8□□□□□ -0.36
GARNL3-220ENST00000496711 NTMT1Q9BV86 223 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 TRIM8Q9BZR9 551 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 ABCG8Q9H221 673 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 TBC1D14Q9P2M4 693 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 CCL27Q9Y4X3 112 aa12.8□□□□□ -0.36
GARNL3-220ENST00000496711 SLC28A1O00337 649 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 FFAR3O14843 346 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 GPR42O15529 346 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 MAP3K13O43283 966 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 AKAP10O43572 662 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 STK16O75716 305 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 RHOP08100 348 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 ENO2P09104 434 aaPredicted RBP12.79□□□□□ -0.36
GARNL3-220ENST00000496711 CYP2A6P11509 494 aaPredicted RBP12.79□□□□□ -0.36
GARNL3-220ENST00000496711 ZNF30P17039 623 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 CCR7P32248 378 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 CTNNB1P35222 781 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 CLCN2P51788 898 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 LIPEQ05469 1076 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 MAD2L1Q13257 205 aaPredicted RBP12.79□□□□□ -0.36
GARNL3-220ENST00000496711 ARHGEF7Q14155 803 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 SLC5A9Q2M3M2 681 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 HABP4Q5JVS0 413 aaKnown RBP12.79□□□□□ -0.36
GARNL3-220ENST00000496711 TBCELQ5QJ74 424 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 C6orf52Q5T4I8 152 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 FOXB2Q5VYV0 432 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 BRAT1Q6PJG6 821 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 SLC2A7Q6PXP3 512 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 MBOAT1Q6ZNC8 495 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 RTL10Q7L3V2 364 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 PLPP6Q8IY26 295 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 AHI1Q8N157 1196 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 ANKFN1Q8N957 763 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 MRPL43Q8N983 215 aaKnown RBP12.79□□□□□ -0.36
GARNL3-220ENST00000496711 OR2A12Q8NGT7 310 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 ZNF597Q96LX8 424 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 CNBD2Q96M20 576 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 CENPKQ9BS16 269 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 SLC29A3Q9BZD2 475 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 ACTL8Q9H568 366 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 COQ10BQ9H8M1 238 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 INTS7Q9NVH2 962 aaKnown RBP12.79□□□□□ -0.36
GARNL3-220ENST00000496711 SMOXQ9NWM0 555 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 KLQ9UEF7 1012 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 SUFUQ9UMX1 484 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 AURKCQ9UQB9 309 aa12.79□□□□□ -0.36
GARNL3-220ENST00000496711 SOBPA7XYQ1 873 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms