RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 GP2P55259 537 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 ENPEPQ07075 957 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 GOLGA8FQ08AF8 430 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 GOLGA8DPQ0D2H9 430 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 SF3A3Q12874 501 aaKnown RBP eCLIP4.32□□□□□ -1.727e-8■■□□□ 13.8
VPS52-222ENST00000495981 SSPNQ14714 243 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 NFIL3Q16649 462 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 FAM133BQ5BKY9 247 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 C10orf120Q5SQS8 335 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 FAM111BQ6SJ93 734 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 TMEM108Q6UXF1 575 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 ADIPOR2Q86V24 386 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 OR4N4Q8N0Y3 316 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.32□□□□□ -1.72
VPS52-222ENST00000495981 ZNF366Q8N895 744 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 IQUBQ8NA54 791 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 SUN3Q8TAQ9 357 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 GOLGA5Q8TBA6 731 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 ADAMTS17Q8TE56 1095 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 ABHD5Q8WTS1 349 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 TMEM171Q8WVE6 324 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 CPT1BQ92523 772 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 TAF4BQ92750 862 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 SEMA4DQ92854 862 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 EXTL1Q92935 676 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 MYEOVQ96EZ4 313 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 LMLNQ96KR4 655 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 XPO6Q96QU8 1125 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 FUZQ9BT04 418 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 GPR174Q9BXC1 333 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 NACA2Q9H009 215 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 ZSCAN16Q9H4T2 348 aaPredicted RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 C6orf106Q9H6K1 298 aaPredicted RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 UNKLQ9H9P5 680 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 PLEKHA2Q9HB19 425 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 TM9SF3Q9HD45 589 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 WDR35Q9P2L0 1181 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 SERGEFQ9UGK8 458 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 RASAL2Q9UJF2 1139 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 AGO1Q9UL18 857 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 RIMKLBQ9ULI2 386 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 NDRG4Q9ULP0 352 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 TRAF3IP3Q9Y228 551 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 OAS3Q9Y6K5 1087 aaKnown RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.32□□□□□ -1.72
VPS52-222ENST00000495981 APCP25054 2843 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 MYLKQ15746 1914 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 HIVEP3Q5T1R4 2406 aa4.32□□□□□ -1.72
VPS52-222ENST00000495981 LRP4O75096 1905 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ZNF469Q96JG9 3925 aaPredicted RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 FAM237AA0A1B0GTK4 181 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 A0A1W2PRX2 142 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 SYNDIG1LA6NDD5 238 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 EFCAB8A8MWE9 144 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 M0QYT0 321 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 PDXKO00764 312 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 CASC3O15234 703 aaKnown RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 RGS10O43665 173 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 TSPAN3O60637 253 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ZFPL1O95159 310 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 SEMA4FO95754 770 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 RPN1P04843 607 aaKnown RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 P4HA1P13674 534 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 GNSP15586 552 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 PFKFB1P16118 471 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 CD58P19256 250 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 WT1P19544 449 aaPredicted RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 NR2F2P24468 414 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ELAVL4P26378 380 aaKnown RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 RBL1P28749 1068 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ACSL1P33121 698 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ACTN2P35609 894 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 KRT20P35900 424 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 GGT5P36269 586 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 GCLMP48507 274 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 CCT8P50990 548 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 AFF3P51826 1226 aaKnown RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 PGDP52209 483 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 CLNS1AP54105 237 aaKnown RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 RAD23BP54727 409 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 YWHAGP61981 247 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS52-222ENST00000495981 RPS14P62263 151 aaKnown RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 PIGFQ07326 219 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 EFEMP1Q12805 493 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 CLCA4Q14CN2 919 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 RPS6KA2Q15349 733 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 TBCCQ15814 346 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 GOLGA7BQ2TAP0 167 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 FAM102AQ5T9C2 384 aaPredicted RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 SFMBT2Q5VUG0 894 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 C1QL3Q5VWW1 255 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ARHGAP17Q68EM7 881 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 PM20D1Q6GTS8 502 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 NADSYN1Q6IA69 706 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 SERPINA13PQ6UXR4 307 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 PIGZQ86VD9 579 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ZNF761Q86XN6 746 aaPredicted RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 TMPRSS6Q8IU80 811 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 TICAM1Q8IUC6 712 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 DHX40Q8IX18 779 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms