RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 NDUFAF2Q8N183 169 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 NUP93Q8N1F7 819 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 EMC1Q8N766 993 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 RBMXL3Q8N7X1 1067 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 TC2NQ8N9U0 490 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 MCUQ8NE86 351 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 TSPAN14Q8NG11 270 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 OR13A1Q8NGR1 328 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 SPATA22Q8NHS9 363 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 SETD6Q8TBK2 473 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 HM13Q8TCT9 377 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 UTP15Q8TED0 518 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 DNASE2BQ8WZ79 361 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 NR4A3Q92570 626 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 SECISBP2LQ93073 1101 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 WBP2Q969T9 261 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 HDAC11Q96DB2 347 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 SIPA1Q96FS4 1042 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 SCRN2Q96FV2 425 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 LMLNQ96KR4 655 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF583Q96ND8 569 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 DACH2Q96NX9 599 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 FNBP1Q96RU3 617 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 SEMA3CQ99985 751 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 NAA11Q9BSU3 229 aaPredicted RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 DESI2Q9BSY9 194 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 MLPHQ9BV36 600 aaPredicted RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 THUMPD3Q9BV44 507 aaKnown RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 MMP27Q9H306 513 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 COPS7BQ9H9Q2 264 aaPredicted RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 EPB41L5Q9HCM4 733 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF334Q9HCZ1 680 aaPredicted RBP2.3□□□□□ -2.04
LMNB1-207ENST00000494185 KCNS2Q9ULS6 477 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 PLAGL1Q9UM63 463 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF148Q9UQR1 794 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 LIPT1Q9Y234 373 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 KNSTRNQ9Y448 316 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 LRP12Q9Y561 859 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 CGNL1Q0VF96 1302 aa2.3□□□□□ -2.04
LMNB1-207ENST00000494185 GPRASP1Q5JY77 1395 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 PDS5AQ29RF7 1337 aaKnown RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF541Q9H0D2 1346 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 A0A087WV48 116 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 GTPBP10A4D1E9 387 aaKnown RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 URADA6NGE7 173 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 MAGEB17A8MXT2 336 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 FAM90A26D6RGX4 464 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 ANKRD28O15084 1053 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 SMAD9O15198 467 aaKnown RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 IPO8O15397 1037 aaKnown RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 ZBTB43O43298 467 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 SYNGR3O43761 229 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 PCDH7O60245 1069 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 FMO6PO60774 539 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 DDNO94850 711 aaPredicted RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 ICAM1P05362 532 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 MMP9P14780 707 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 CSF2RAP15509 400 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 STMN1P16949 149 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 ERCC2P18074 760 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 CASTP20810 708 aaKnown RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 PSMA3P25788 255 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 CORO1AP31146 461 aaKnown RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 TLX1P31314 330 aaPredicted RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 HNF4AP41235 474 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 ARSEP51690 589 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 GPR143P51810 404 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 DLX5P56178 289 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 BRWD1-AS2P59051 145 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 SIRPAP78324 504 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 KCNJ10P78508 379 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 UBXN1Q04323 297 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 SCN1BQ07699 218 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 CAMK2DQ13557 499 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 KRT33BQ14525 404 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 SLMAPQ14BN4 828 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 KRTCAP3Q53RY4 240 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 ARMC4Q5T2S8 1044 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 LCE1AQ5T7P2 110 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 C18orf63Q68DL7 685 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 DHRS7BQ6IAN0 325 aaPredicted RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 CAVIN1Q6NZI2 390 aaKnown RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 PACS1Q6VY07 963 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 FAM43BQ6ZT52 329 aaPredicted RBP2.29□□□□□ -2.04
LMNB1-207ENST00000494185 Q6ZTC4 211 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 MSANTD1Q6ZTZ1 278 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 KCTD8Q6ZWB6 473 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 RAPH1Q70E73 1250 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 CAMKMTQ7Z624 323 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 LONP2Q86WA8 852 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 NRROSQ86YC3 692 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 MAP7D3Q8IWC1 876 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 ODF3L1Q8IXM7 274 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 PM20D2Q8IYS1 436 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 CCDC170Q8IYT3 715 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 C1orf87Q8N0U7 546 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 CARNMT1Q8N4J0 409 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 PI4KAP1Q8N8J0 262 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 ZNF441Q8N8Z8 693 aa2.29□□□□□ -2.04
LMNB1-207ENST00000494185 HJURPQ8NCD3 748 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms