RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SNX20Q7Z614 316 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 DCBLD1Q8N8Z6 715 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 NARS2Q96I59 477 aaKnown RBP18.88■□□□□ 0.61
COL27A1-207ENST00000494090 TCF25Q9BQ70 676 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 C1QTNF1Q9BXJ1 281 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 GPC6Q9Y625 555 aaPredicted RBP18.88■□□□□ 0.61
COL27A1-207ENST00000494090 TLL2Q9Y6L7 1015 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 TCRBV7S3A2A0A539 114 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 RHPN2P1A8MT19 583 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 C9JVG2 144 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 DLG1Q12959 904 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 AKAP14Q86UN6 197 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 VANGL1Q8TAA9 524 aaPredicted RBP18.88■□□□□ 0.61
COL27A1-207ENST00000494090 CLCC1Q96S66 551 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 IL1RAPQ9NPH3 570 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 EQTNQ9NQ60 294 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 FKBPLQ9UIM3 349 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 PCDHGA11Q9Y5H2 935 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 FMN2Q9NZ56 1722 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 CASKO14936 926 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 ADAMDEC1O15204 470 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 MASP1P48740 699 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 FBXO48Q5FWF7 155 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 BICRALQ6AI39 1079 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 FAM131AQ6UXB0 335 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 ZNF317Q96PQ6 595 aaPredicted RBP18.88■□□□□ 0.61
COL27A1-207ENST00000494090 FAM159BA6NKW6 160 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 FAM163BP0C2L3 166 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 KCNJ11Q14654 390 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 MYBPC3Q14896 1274 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 NCBP2-AS2Q69YL0 99 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 FAR1Q8WVX9 515 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 NODALQ96S42 347 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 TAPBPLQ9BX59 468 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 ATG10Q9H0Y0 220 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 COQ10BQ9H8M1 238 aa18.88■□□□□ 0.61
COL27A1-207ENST00000494090 RIIAD1A6NNX1 92 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 UBXN7O94888 489 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 MT-ND1P03886 318 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 OTOP2Q7RTS6 562 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 TMEM110Q86TL2 294 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 C1GALT1C1Q96EU7 318 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 DSN1Q9H410 356 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 ARHGDIBP52566 201 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 SP2Q02086 613 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 GRSF1Q12849 480 aaKnown RBP eCLIP18.87■□□□□ 0.613e-8■■□□□ 13.7
COL27A1-207ENST00000494090 SMCO1Q147U7 214 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 CPNE9Q8IYJ1 553 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 FAM156AQ8NDB6 213 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 PTTG2Q9NZH5 202 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 PI15O43692 258 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 PEX10O60683 326 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 IMPDH1P20839 514 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 HCAR3P49019 387 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 IRF9Q00978 393 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 CHIT1Q13231 466 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 FAM91A1Q658Y4 838 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 RANBP3LQ86VV4 465 aaPredicted RBP18.87■□□□□ 0.61
COL27A1-207ENST00000494090 KREMEN2Q8NCW0 462 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 OR10A6Q8NH74 314 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 TNKS2Q9H2K2 1166 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 C1orf109Q9NX04 203 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 ZNF222Q9UK12 451 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 SAGE2PA6NJ88 616 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 CCDC85CA6NKD9 419 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 CXCR6O00574 342 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 KLF11O14901 512 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 NCK1P16333 377 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 DCST1Q5T197 706 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 CIR1Q86X95 450 aaPredicted RBP18.87■□□□□ 0.61
COL27A1-207ENST00000494090 SLC9A6Q92581 669 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 RBM18Q96H35 190 aaKnown RBP18.87■□□□□ 0.61
COL27A1-207ENST00000494090 LMLNQ96KR4 655 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 SLC7A8Q9UHI5 535 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 ZZZ3Q8IYH5 903 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 IL12RB2Q99665 862 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 ING3Q9NXR8 418 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 PDE10AQ9Y233 779 aa18.87■□□□□ 0.61
COL27A1-207ENST00000494090 ZNF541Q9H0D2 1346 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 FAM234BA2RU67 622 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 C8AP07357 584 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 CAMK1Q14012 370 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 UBXN11Q5T124 520 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 EGFLAMQ63HQ2 1017 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 IFNLR1Q8IU57 520 aaPredicted RBP18.86■□□□□ 0.61
COL27A1-207ENST00000494090 FLCNQ8NFG4 579 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 HAVCR1Q96D42 359 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 ZNF599Q96NL3 588 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 PEAK1Q9H792 1746 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 SNED1Q8TER0 1413 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 CD247P20963 164 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 ALDH4A1P30038 563 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 WASP42768 502 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 ZNF280AP59817 542 aaPredicted RBP18.86■□□□□ 0.61
COL27A1-207ENST00000494090 HERVK_113P63132 956 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 SNAPC1Q16533 368 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 DPY19L1Q2PZI1 675 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 ARL14EPQ8N8R7 260 aaPredicted RBP18.86■□□□□ 0.61
COL27A1-207ENST00000494090 SLC13A3Q8WWT9 602 aa18.86■□□□□ 0.61
COL27A1-207ENST00000494090 EXOSC8Q96B26 276 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms