RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-217	ENST00000492883	GPR18	Q14330	331 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	PLCL1	Q15111	1095 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	TMED2	Q15363	201 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	CTSL3P	Q5NE16	218 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	STEAP4	Q687X5	459 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	DUS1L	Q6P1R4	473 aa	Known RBP	13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	TRMT10B	Q6PF06	316 aa	Known RBP	13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	CAPN12	Q6ZSI9	719 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	OTOA	Q7RTW8	1153 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	LKAAEAR1	Q8TD35	194 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	IFT81	Q8WYA0	676 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	NCSTN	Q92542	709 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	TFG	Q92734	400 aa	Predicted RBP	13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	TMEM74	Q96NL1	305 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	FOXP3	Q9BZS1	431 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	PLAC1	Q9HBJ0	212 aa		13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	DMGDH	Q9UI17	866 aa	Known RBP	13.65	□□□□□ -0.22
CCM2-217	ENST00000492883	LILRA5	A6NI73	299 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	ESPN	B1AK53	854 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	TMX2-CTNND1	H3BSU7	103 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	ZNF500	O60304	480 aa	Predicted RBP	13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	NIPSNAP2	O75323	286 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	UBXN7	O94888	489 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	TYRP1	P17643	537 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	AOAH	P28039	575 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	NDUFS1	P28331	727 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	LEPR	P48357	1165 aa	Known RBP	13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	INHBC	P55103	352 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	MGAT5	Q09328	741 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	SQSTM1	Q13501	440 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	CLPP	Q16740	277 aa	Predicted RBP	13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	TEDDM1	Q5T9Z0	273 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	CNST	Q6PJW8	725 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	PDZD3	Q86UT5	571 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	PHC3	Q8NDX5	983 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	ZFPM2	Q8WW38	1151 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	JPH3	Q8WXH2	748 aa	Predicted RBP	13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	SEC14L1	Q92503	715 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	FAM136A	Q96C01	138 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	GRAMD1A	Q96CP6	724 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	EPB41L1	Q9H4G0	881 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	MTRF1L	Q9UGC7	380 aa	Known RBP	13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	ASF1A	Q9Y294	204 aa		13.64	□□□□□ -0.23
CCM2-217	ENST00000492883	DMXL1	Q9Y485	3027 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	GPC4	O75487	556 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	AHSG	P02765	367 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	PROS1	P07225	676 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	HOXB3	P14651	431 aa	Predicted RBP	13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	MPST	P25325	297 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	SSTR1	P30872	391 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	MAGEA4	P43358	317 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	ABR	Q12979	859 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	FRG1	Q14331	258 aa	Known RBP	13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	PHF19	Q5T6S3	580 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	TMEM71	Q6P5X7	295 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	KLHL35	Q6PF15	583 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	KIAA0408	Q6ZU52	694 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	C3orf62	Q6ZUJ4	267 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	CNTN4	Q8IWV2	1026 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	SLC22A15	Q8IZD6	547 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	CFAP61	Q8NHU2	1237 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	SKA2	Q8WVK7	121 aa	Predicted RBP	13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	ATXN7L3B	Q96GX2	97 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	C9orf72	Q96LT7	481 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	DPYSL5	Q9BPU6	564 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	NUDT22	Q9BRQ3	303 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	PHACTR1	Q9C0D0	580 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	STRADB	Q9C0K7	418 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	SEMA6C	Q9H3T2	930 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	MVB12B	Q9H7P6	319 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	ZDHHC18	Q9NUE0	388 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	MOCS1	Q9NZB8	636 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	ZFAT	Q9P243	1243 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	ENTPD2	Q9Y5L3	495 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	COMMD10	Q9Y6G5	202 aa		13.63	□□□□□ -0.23
CCM2-217	ENST00000492883	DNAH14	Q0VDD8	3507 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	TRABD2B	A6NFA1	517 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	PCNX2	A6NKB5	2137 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	SLCO2B1	O94956	709 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	RHOXF2B	P0C7M4	288 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	ACADL	P28330	430 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	CFHR1	Q03591	330 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	ZFP36L1	Q07352	338 aa	Known RBP	13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	PRKG2	Q13237	762 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	SNAP47	Q5SQN1	464 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	PLEKHS1	Q5SXH7	462 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	ZNF549	Q6P9A3	640 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	WDR74	Q6RFH5	385 aa	Predicted RBP	13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	ZNF574	Q6ZN55	896 aa	Predicted RBP	13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	CEP128	Q6ZU80	1094 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	TMPRSS9	Q7Z410	1059 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	B3GNT8	Q7Z7M8	397 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	PLXDC1	Q8IUK5	500 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	VRK3	Q8IV63	474 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	IFT20	Q8IY31	132 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	ZBTB2	Q8N680	514 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	ACVR1C	Q8NER5	493 aa		13.62	□□□□□ -0.23
CCM2-217	ENST00000492883	OR4D9	Q8NGE8	314 aa		13.62	□□□□□ -0.23

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