RNA–Protein interactions for RNA: ENST00000491857.1

PSMD4-212, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 461 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-212ENST00000491857 NENFQ9UMX5 172 aa16.47■□□□□ 0.23
PSMD4-212ENST00000491857 B3GNT3Q9Y2A9 372 aa16.47■□□□□ 0.23
PSMD4-212ENST00000491857 LUC7L2Q9Y383 392 aaKnown RBP16.47■□□□□ 0.23
PSMD4-212ENST00000491857 ABCA12Q86UK0 2595 aa16.47■□□□□ 0.23
PSMD4-212ENST00000491857 C3orf70A6NLC5 250 aaPredicted RBP16.46■□□□□ 0.23
PSMD4-212ENST00000491857 CBX6O95503 412 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 IGHEP01854 428 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 CAPN1P07384 714 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 HADHAP40939 763 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 MESDQ14696 234 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 NOMO1Q15155 1222 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 KYNUQ16719 465 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 FAM69BQ5VUD6 431 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 LYPLAL1Q5VWZ2 237 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 FBXO38Q6PIJ6 1188 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 KDELC1Q6UW63 502 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 DET1Q7L5Y6 550 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 SLC25A41Q8N5S1 370 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 SPDYE1Q8NFV5 336 aaPredicted RBP16.46■□□□□ 0.23
PSMD4-212ENST00000491857 OR4E2Q8NGC2 313 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 OR1L3Q8NH93 324 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 C19orf60Q96EN9 201 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 FER1L6-AS2Q96M78 137 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 PPM1MQ96MI6 270 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 ASF1BQ9NVP2 202 aa16.46■□□□□ 0.23
PSMD4-212ENST00000491857 TEP1Q99973 2627 aaKnown RBP16.45■□□□□ 0.22
PSMD4-212ENST00000491857 GSAPA4D1B5 854 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 ANKUB1A6NFN9 424 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 E7EQ34 232 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 KRT86O43790 486 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 LCA5LO95447 670 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 PRAMEF1O95521 474 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 KRT1P04264 644 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 PBX1P40424 430 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 NR2C2P49116 596 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 DYNLT1P63172 113 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 TPM4P67936 248 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 RAPSNQ13702 412 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 PRKD1Q15139 912 aaPredicted RBP16.45■□□□□ 0.22
PSMD4-212ENST00000491857 PTCHD3Q3KNS1 767 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 PLEKHN1Q494U1 663 aaPredicted RBP16.45■□□□□ 0.22
PSMD4-212ENST00000491857 BCL7AQ4VC05 210 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 ZNF789Q5FWF6 425 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 B4GALNT4Q76KP1 1039 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 TICAM1Q8IUC6 712 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 TTC13Q8NBP0 860 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 CLEC1AQ8NC01 280 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 ACVR1CQ8NER5 493 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 ZNF398Q8TD17 642 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 TFB1MQ8WVM0 346 aaKnown RBP16.45■□□□□ 0.22
PSMD4-212ENST00000491857 LCN9Q8WX39 176 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 TM9SF4Q92544 642 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 LINC00615Q96LM1 132 aaPredicted RBP16.45■□□□□ 0.22
PSMD4-212ENST00000491857 RMDN2Q96LZ7 410 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 CCM2Q9BSQ5 444 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 ANP32EQ9BTT0 268 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 ILKAPQ9H0C8 392 aaPredicted RBP16.45■□□□□ 0.22
PSMD4-212ENST00000491857 SRMSQ9H3Y6 488 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 FAM8A1Q9UBU6 413 aa16.45■□□□□ 0.22
PSMD4-212ENST00000491857 LRBAP50851 2863 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 GAPDHSO14556 408 aaPredicted RBP16.44■□□□□ 0.22
PSMD4-212ENST00000491857 STX7O15400 261 aaKnown RBP16.44■□□□□ 0.22
PSMD4-212ENST00000491857 DDX3YO15523 660 aaKnown RBP16.44■□□□□ 0.22
PSMD4-212ENST00000491857 IPO13O94829 963 aaKnown RBP16.44■□□□□ 0.22
PSMD4-212ENST00000491857 NFKB1P19838 968 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 OTX2P32243 289 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 CD68P34810 354 aaPredicted RBP16.44■□□□□ 0.22
PSMD4-212ENST00000491857 CA5AP35218 305 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 ARHGAP25P42331 645 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 CHRNA4P43681 627 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 MPP3Q13368 585 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 SLC1A5Q15758 541 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 SLC18A3Q16572 532 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 MRGPREQ86SM8 312 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 CISD2Q8N5K1 135 aaKnown RBP16.44■□□□□ 0.22
PSMD4-212ENST00000491857 MRGPRX2Q96LB1 330 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 FSD1LQ9BXM9 530 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 PACSIN1Q9BY11 444 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 PITPNM3Q9BZ71 974 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 KLHL8Q9P2G9 620 aaPredicted RBP16.44■□□□□ 0.22
PSMD4-212ENST00000491857 FER1L5A0AVI2 2057 aa16.44■□□□□ 0.22
PSMD4-212ENST00000491857 CCDC88CQ9P219 2028 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 PEX12O00623 359 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 BUD23O43709 281 aaKnown RBP16.43■□□□□ 0.22
PSMD4-212ENST00000491857 POLBP06746 335 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 CD63P08962 238 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 TMEM253P0C7T8 217 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 RALBP11234 206 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 ST6GAL1P15907 406 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 PRDX3P30048 256 aaKnown RBP16.43■□□□□ 0.22
PSMD4-212ENST00000491857 UBASH3AP57075 661 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 SSPNQ14714 243 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 MYBPC3Q14896 1274 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 LRRC38Q5VT99 294 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 IGFL3Q6UXB1 125 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 CFAP206Q8IYR0 622 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 GPR135Q8IZ08 494 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 GALNT16Q8N428 558 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 IPMKQ8NFU5 416 aa16.43■□□□□ 0.22
PSMD4-212ENST00000491857 HM13Q8TCT9 377 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms