RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 BCL7AQ4VC05 210 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 PRAMEF17Q5VTA0 474 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 LCN10Q6JVE6 187 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 FAM198BQ6UWH4 519 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 DET1Q7L5Y6 550 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 RAB43Q86YS6 212 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 RHOT2Q8IXI1 618 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 SYTL1Q8IYJ3 562 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 ZBTB2Q8N680 514 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 ACVR1CQ8NER5 493 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 IPMKQ8NFU5 416 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 OR4E2Q8NGC2 313 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 DHRS4Q9BTZ2 278 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 FSD1LQ9BXM9 530 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 SLC7A5P2Q9GIP4 190 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 SERTAD3Q9UJW9 196 aa18.53■□□□□ 0.56
GGPS1-206ENST00000488594 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.53■□□□□ 0.56
GGPS1-206ENST00000488594 WIPF3A6NGB9 483 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 A6NL46 340 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 TMEM150CB9EJG8 249 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 C9J4A7 227 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 BUD23O43709 281 aaKnown RBP18.52■□□□□ 0.55
GGPS1-206ENST00000488594 CAPN1P07384 714 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 SLC1A1P43005 524 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 ARCN1P48444 511 aaKnown RBP18.52■□□□□ 0.55
GGPS1-206ENST00000488594 ASTE1Q2TB18 679 aaPredicted RBP18.52■□□□□ 0.55
GGPS1-206ENST00000488594 ZNF789Q5FWF6 425 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 VWA5B1Q5TIE3 1220 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 FBXO38Q6PIJ6 1188 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 IQCKQ8N0W5 287 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 OR1L3Q8NH93 324 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 LCN9Q8WX39 176 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 SGSM3Q96HU1 749 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 PPM1MQ96MI6 270 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 IP6K3Q96PC2 410 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 SRMSQ9H3Y6 488 aa18.52■□□□□ 0.55
GGPS1-206ENST00000488594 KLHL41O60662 606 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 HBQ1P09105 142 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 RALBP11234 206 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 AGXTP21549 392 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 MFSD7Q6UXD7 560 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 PID1Q7Z2X4 250 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 LUZP1Q86V48 1076 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 DCUN1D1Q96GG9 259 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 OXNAD1Q96HP4 312 aaPredicted RBP18.51■□□□□ 0.55
GGPS1-206ENST00000488594 RMDN2Q96LZ7 410 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 C17orf62Q9BQA9 187 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 PITPNM3Q9BZ71 974 aa18.51■□□□□ 0.55
GGPS1-206ENST00000488594 SAE1Q9UBE0 346 aaPredicted RBP18.51■□□□□ 0.55
GGPS1-206ENST00000488594 MED13Q9UHV7 2174 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 CREBBPQ92793 2442 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 GSAPA4D1B5 854 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 C2orf81A6NN90 581 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 E7EQ34 232 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 AKR1B10O60218 316 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 CST8O60676 142 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 SRP72O76094 671 aaKnown RBP18.5■□□□□ 0.55
GGPS1-206ENST00000488594 LCA5LO95447 670 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 ALPPP05187 535 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 POLBP06746 335 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 PRDX3P30048 256 aaKnown RBP18.5■□□□□ 0.55
GGPS1-206ENST00000488594 HADHAP40939 763 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 CDKN2BP42772 138 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 ATP1A4Q13733 1029 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 TAZQ16635 292 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 FAM69BQ5VUD6 431 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 CAVIN1Q6NZI2 390 aaKnown RBP18.5■□□□□ 0.55
GGPS1-206ENST00000488594 CFAP206Q8IYR0 622 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 ZNF567Q8N184 647 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 HM13Q8TCT9 377 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 P3H4Q92791 437 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 FER1L6-AS2Q96M78 137 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 ASB8Q9H765 288 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 FAM8A1Q9UBU6 413 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 TRHDEQ9UKU6 1024 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 B3GNT3Q9Y2A9 372 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 DOPEY1Q5JWR5 2465 aa18.5■□□□□ 0.55
GGPS1-206ENST00000488594 LDLRP01130 860 aa18.49■□□□□ 0.55
GGPS1-206ENST00000488594 IGHEP01854 428 aa18.49■□□□□ 0.55
GGPS1-206ENST00000488594 PECAM1P16284 738 aaPredicted RBP18.49■□□□□ 0.55
GGPS1-206ENST00000488594 TAF1AQ15573 450 aaPredicted RBP18.49■□□□□ 0.55
GGPS1-206ENST00000488594 PTCHD3Q3KNS1 767 aa18.49■□□□□ 0.55
GGPS1-206ENST00000488594 OR8K1Q8NGG5 319 aa18.49■□□□□ 0.55
GGPS1-206ENST00000488594 HEXDCQ8WVB3 486 aa18.49■□□□□ 0.55
GGPS1-206ENST00000488594 SNRNP40Q96DI7 357 aaKnown RBP18.49■□□□□ 0.55
GGPS1-206ENST00000488594 ZNHIT6Q9NWK9 470 aaKnown RBP18.49■□□□□ 0.55
GGPS1-206ENST00000488594 ERRFI1Q9UJM3 462 aaPredicted RBP18.49■□□□□ 0.55
GGPS1-206ENST00000488594 ARL5AQ9Y689 179 aa18.49■□□□□ 0.55
GGPS1-206ENST00000488594 C17orf113A0A1B0GUU1 675 aa18.48■□□□□ 0.55
GGPS1-206ENST00000488594 C5orf60A6NFR6 353 aa18.48■□□□□ 0.55
GGPS1-206ENST00000488594 GOLGA6L19H0YKK7 550 aa18.48■□□□□ 0.55
GGPS1-206ENST00000488594 DDX3YO15523 660 aaKnown RBP18.48■□□□□ 0.55
GGPS1-206ENST00000488594 KRT86O43790 486 aa18.48■□□□□ 0.55
GGPS1-206ENST00000488594 CBX6O95503 412 aa18.48■□□□□ 0.55
GGPS1-206ENST00000488594 TPM3P06753 285 aa18.48■□□□□ 0.55
GGPS1-206ENST00000488594 ST6GAL1P15907 406 aa18.48■□□□□ 0.55
GGPS1-206ENST00000488594 PRLHRP49683 370 aa18.48■□□□□ 0.55
GGPS1-206ENST00000488594 NR6A1Q15406 480 aa18.48■□□□□ 0.55
GGPS1-206ENST00000488594 PLEKHN1Q494U1 663 aaPredicted RBP18.48■□□□□ 0.55
GGPS1-206ENST00000488594 ZRANB3Q5FWF4 1079 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms