RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 MYOD1P15172 320 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 CASTP20810 708 aaKnown RBP5.54□□□□□ -1.52
CUL3-211ENST00000487558 USP8P40818 1118 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 TROAPQ12815 778 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 ZNF234Q14588 700 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 MOXD1Q6UVY6 613 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 SPATA21Q7Z572 469 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 SPATA19Q7Z5L4 167 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 TMPRSS12Q86WS5 348 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 GBGT1Q8N5D6 347 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 ZNF114Q8NC26 417 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 PPFIBP2Q8ND30 876 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 TMEM255BQ8WV15 326 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 SEMA4DQ92854 862 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 FAM84BQ96KN1 310 aaPredicted RBP5.54□□□□□ -1.52
CUL3-211ENST00000487558 ZNF582Q96NG8 517 aaPredicted RBP5.54□□□□□ -1.52
CUL3-211ENST00000487558 NEURL2Q9BR09 285 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 GPATCH1Q9BRR8 931 aaKnown RBP5.54□□□□□ -1.52
CUL3-211ENST00000487558 LMF2Q9BU23 707 aaKnown RBP5.54□□□□□ -1.52
CUL3-211ENST00000487558 C2orf40Q9H1Z8 148 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 SLA2Q9H6Q3 261 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 MRPL44Q9H9J2 332 aaKnown RBP5.54□□□□□ -1.52
CUL3-211ENST00000487558 KLHL9Q9P2J3 617 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 SNX7Q9UNH6 387 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 PADI2Q9Y2J8 665 aa5.54□□□□□ -1.52
CUL3-211ENST00000487558 MYMKA6NI61 221 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 TMEM178BH3BS89 294 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 ZNHIT1O43257 154 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 LINC00271P0C7V0 271 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 FAM106CPP0CH98 169 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 HNRNPKP61978 463 aaKnown RBP eCLIP5.53□□□□□ -1.52
CUL3-211ENST00000487558 PRKCZQ05513 592 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 MZT1Q08AG7 82 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 PTK6Q13882 451 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 TUBB2AQ13885 445 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 GTF2H2Q13888 395 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 NFATC4Q14934 902 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 ODF2Q5BJF6 829 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 GTF2H2CQ6P1K8 395 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 KLC3Q6P597 504 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 CCDC91Q7Z6B0 441 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 GPATCH11Q8N954 259 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 AFAP1L1Q8TED9 768 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 SLC20A1Q8WUM9 679 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 TMED6Q8WW62 240 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 ZNF385AQ96PM9 386 aaKnown RBP5.53□□□□□ -1.52
CUL3-211ENST00000487558 FEVQ99581 238 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 TUBB2BQ9BVA1 445 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 SEZ6LQ9BYH1 1024 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 UBTD1Q9HAC8 227 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 OCIAD1Q9NX40 245 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 CHCHD3Q9NX63 227 aaKnown RBP5.53□□□□□ -1.52
CUL3-211ENST00000487558 MIOSQ9NXC5 875 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 WNT16Q9UBV4 365 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 CPSF3Q9UKF6 684 aaKnown RBP5.53□□□□□ -1.52
CUL3-211ENST00000487558 VDAC3Q9Y277 283 aa5.53□□□□□ -1.52
CUL3-211ENST00000487558 A0A1W2PPQ1 181 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 MED19A0JLT2 244 aaPredicted RBP5.52□□□□□ -1.53
CUL3-211ENST00000487558 TMEM221A6NGB7 291 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 PTGESO14684 152 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 CLIC2O15247 247 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 PMS2P2O95744 297 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 GBAP04062 536 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 ZNF23P17027 643 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 PSMC4P43686 418 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 NAGLUP54802 743 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 MLLT10P55197 1068 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 DLG1Q12959 904 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 E2F5Q15329 346 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 SETMARQ53H47 684 aaPredicted RBP5.52□□□□□ -1.53
CUL3-211ENST00000487558 ZNF549Q6P9A3 640 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 TMPRSS11FQ6ZWK6 438 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.52□□□□□ -1.53
CUL3-211ENST00000487558 ABI3BPQ7Z7G0 1075 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 SNX32Q86XE0 403 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 TIGD4Q8IY51 512 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 FBXL14Q8N1E6 418 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 ZNF611Q8N823 705 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 KCNH5Q8NCM2 988 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 SPATA22Q8NHS9 363 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 PHF21BQ96EK2 531 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 BTBD10Q9BSF8 475 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 DDX43Q9NXZ2 648 aaKnown RBP5.52□□□□□ -1.53
CUL3-211ENST00000487558 TBC1D7Q9P0N9 293 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 DNAJB9Q9UBS3 223 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 KCNS2Q9ULS6 477 aa5.52□□□□□ -1.53
CUL3-211ENST00000487558 A0A0G2JPF8 293 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 ZCWPW2A0A1B0GU75 182 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 HNRNPCL3B7ZW38 293 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 OAZ2O95190 189 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 HNRNPCL4P0DMR1 293 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 GM2AP17900 193 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 HOXA11P31270 313 aaPredicted RBP5.51□□□□□ -1.53
CUL3-211ENST00000487558 PRKCIP41743 596 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 ISL1P61371 349 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 EGR4Q05215 589 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 SLC20A2Q08357 652 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 TWISTNBQ3B726 338 aaPredicted RBP5.51□□□□□ -1.53
CUL3-211ENST00000487558 PRR27Q6MZM9 219 aa5.51□□□□□ -1.53
CUL3-211ENST00000487558 MFSD12Q6NUT3 480 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms