RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 GPS1Q13098 491 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 GPR18Q14330 331 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 RPE65Q16518 533 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 GPR33Q49SQ1 333 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 ZNF658BQ4V348 819 aaPredicted RBP7.01□□□□□ -1.29
UBE4B-209ENST00000487244 BCL7AQ4VC05 210 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 AGAP9Q5VTM2 703 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 METRNLQ641Q3 311 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 CCDC137Q6PK04 289 aaKnown RBP7.01□□□□□ -1.29
UBE4B-209ENST00000487244 CES3Q6UWW8 571 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 ABRAXAS1Q6UWZ7 409 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 NAPRTQ6XQN6 538 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 TMEM26Q6ZUK4 368 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 RAB11FIP2Q7L804 512 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 LDB1Q86U70 411 aaPredicted RBP7.01□□□□□ -1.29
UBE4B-209ENST00000487244 PIM3Q86V86 326 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 TRIM48Q8IWZ4 208 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 AGGF1Q8N302 714 aaeCLIP7.01□□□□□ -1.29
UBE4B-209ENST00000487244 MPP5Q8N3R9 675 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 WDR36Q8NI36 951 aaKnown RBP7.01□□□□□ -1.29
UBE4B-209ENST00000487244 ACTRT1Q8TDG2 376 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 HNRNPLLQ8WVV9 542 aaKnown RBP7.01□□□□□ -1.29
UBE4B-209ENST00000487244 CPT1BQ92523 772 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 ULK4Q96C45 1275 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 CXorf40BQ96DE9 158 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 DCUN1D1Q96GG9 259 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 CAPZA3Q96KX2 299 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 RMDN2Q96LZ7 410 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 TMEM74Q96NL1 305 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 SLC46A1Q96NT5 459 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 RANBP9Q96S59 729 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 NRTNQ99748 197 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 C19orf43Q9BQ61 176 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 WWP1Q9H0M0 922 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 SLC40A1Q9NP59 571 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 ENAMQ9NRM1 1142 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 HOMER3Q9NSC5 361 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 MARCH4Q9P2E8 410 aaPredicted RBP7.01□□□□□ -1.29
UBE4B-209ENST00000487244 LOXL2Q9Y4K0 774 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 CACNA1GO43497 2377 aa7.01□□□□□ -1.29
UBE4B-209ENST00000487244 ATRXP46100 2492 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 A0A087WV48 116 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 LILRA5A6NI73 299 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 A8MU76 341 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 GOLGA8MH3BSY2 632 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 DUX1O43812 170 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 PRAMEF10O60809 474 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 PHF2O75151 1096 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 GAS8O95995 478 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 VIPP01282 170 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 POLBP06746 335 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 ITGA2BP08514 1039 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 F7P08709 466 aaPredicted RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 MTHFD1P11586 935 aaKnown RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 BMP4P12644 408 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 SLC2A4P14672 509 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 VCLP18206 1134 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 XRCC1P18887 633 aaPredicted RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 TPSB2P20231 275 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 ARNTP27540 789 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 PDHA2P29803 388 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 MAGEA6P43360 314 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 PREPP48147 710 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 LEPRP48357 1165 aaKnown RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 PPM1FP49593 454 aaPredicted RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 LIMK2P53671 638 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 GPLD1P80108 840 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 SQSTM1Q13501 440 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 TPSAB1Q15661 275 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 SKIDA1Q1XH10 827 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 SNAP47Q5SQN1 464 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 IGF2-ASQ6U949 168 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 AFTPHQ6ULP2 937 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 LYPD4Q6UWN0 246 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 WASH2PQ6VEQ5 465 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 CLEC14AQ86T13 490 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 CAND1Q86VP6 1230 aaKnown RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 CREG2Q8IUH2 290 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 FBXO39Q8N4B4 442 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 PPHLN1Q8NEY8 458 aaKnown RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 OR4D9Q8NGE8 314 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 OR6P1Q8NGX9 317 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 OR2L2Q8NH16 312 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 OR10G6Q8NH81 332 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 LKAAEAR1Q8TD35 194 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 NCSTNQ92542 709 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 RSC1A1Q92681 617 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 FGF11Q92914 225 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 GRAMD1AQ96CP6 724 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 MFSD3Q96ES6 412 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 AHCYL2Q96HN2 611 aaKnown RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 ZNF514Q96K75 400 aaPredicted RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 LINC00615Q96LM1 132 aaPredicted RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 STRADBQ9C0K7 418 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 DDX47Q9H0S4 455 aaKnown RBP7□□□□□ -1.29
UBE4B-209ENST00000487244 WASH6PQ9NQA3 447 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 TREX1Q9NSU2 369 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 POT1Q9NUX5 634 aa7□□□□□ -1.29
UBE4B-209ENST00000487244 IMP3Q9NV31 184 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms