RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 B3GALT5-AS1P59052 145 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 PPARDQ03181 441 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 GAGE2BQ13066 116 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 SLC1A5Q15758 541 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 GAGE2EQ4V326 116 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 XKR6Q5GH73 641 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 GCNT6Q5T4J0 391 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 BSPRYQ5W0U4 402 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 ADALQ6DHV7 355 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 FAM109BQ6ICB4 259 aaPredicted RBP2.84□□□□□ -1.95
VPS50-216ENST00000484954 GAGE2AQ6NT46 116 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 SARM1Q6SZW1 724 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 STXBP4Q6ZWJ1 553 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 ZNF440Q8IYI8 595 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 PPHLN1Q8NEY8 458 aaKnown RBP2.84□□□□□ -1.95
VPS50-216ENST00000484954 OR2T11Q8NH01 316 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 GRHL3Q8TE85 626 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 HSD17B8Q92506 261 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 USP6NLQ92738 828 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 MOCOSQ96EN8 888 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 GIMAP5Q96F15 307 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 FAM81BQ96LP2 452 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 MYADMQ96S97 322 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 PYGO2Q9BRQ0 406 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 SYT11Q9BT88 431 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 CABLES2Q9BTV7 478 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 C1QTNF1Q9BXJ1 281 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 TRIM15Q9C019 465 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 PPIL3Q9H2H8 161 aaKnown RBP2.84□□□□□ -1.95
VPS50-216ENST00000484954 SH2D4AQ9H788 454 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 KAT14Q9H8E8 782 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 ACKR4Q9NPB9 350 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 A4GALTQ9NPC4 353 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 ZDHHC18Q9NUE0 388 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 INTS9Q9NV88 658 aaKnown RBP2.84□□□□□ -1.95
VPS50-216ENST00000484954 TAB2Q9NYJ8 693 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 RHCGQ9UBD6 479 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 GAGE2DQ9UEU5 116 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 SLC7A7Q9UM01 511 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 EXOGQ9Y2C4 368 aaKnown RBP2.84□□□□□ -1.95
VPS50-216ENST00000484954 RIPK3Q9Y572 518 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 LYVE1Q9Y5Y7 322 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 SESN1Q9Y6P5 492 aa2.84□□□□□ -1.95
VPS50-216ENST00000484954 IGHV4-4A0A075B6R2 117 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 A0A087WW49 117 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 MYO1GB0I1T2 1018 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 NDUFS4O43181 175 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 USO1O60763 962 aaKnown RBP2.83□□□□□ -1.96
VPS50-216ENST00000484954 RSL1D1O76021 490 aaKnown RBP2.83□□□□□ -1.96
VPS50-216ENST00000484954 AP2A2O94973 939 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 DUS4LO95620 317 aaKnown RBP2.83□□□□□ -1.96
VPS50-216ENST00000484954 CLTBP09497 229 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 MAN1A1P33908 653 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 SLC6A12P48065 614 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 RPS18P62269 152 aaKnown RBP2.83□□□□□ -1.96
VPS50-216ENST00000484954 SNRPD1P62314 119 aaKnown RBP2.83□□□□□ -1.96
VPS50-216ENST00000484954 MRPS5P82675 430 aaKnown RBP2.83□□□□□ -1.96
VPS50-216ENST00000484954 DMPKQ09013 629 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 GPR17Q13304 367 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 ENPP2Q13822 863 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 GRTP1Q5TC63 336 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 CHST9Q7L1S5 443 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 ARID3BQ8IVW6 561 aaPredicted RBP2.83□□□□□ -1.96
VPS50-216ENST00000484954 ZNF611Q8N823 705 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 TMEM178AQ8NBL3 297 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 OR1J1Q8NGS3 322 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 DACH2Q96NX9 599 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 IWS1Q96ST2 819 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 C16orf70Q9BSU1 422 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 FTOQ9C0B1 505 aaKnown RBP eCLIP2.83□□□□□ -1.96
VPS50-216ENST00000484954 LAT2Q9GZY6 243 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 SMC4Q9NTJ3 1288 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 OLA1Q9NTK5 396 aaKnown RBP2.83□□□□□ -1.96
VPS50-216ENST00000484954 OSER1Q9NX31 292 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 TAS2R14Q9NYV8 317 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 NENFQ9UMX5 172 aa2.83□□□□□ -1.96
VPS50-216ENST00000484954 TDRD9Q8NDG6 1382 aaKnown RBP2.83□□□□□ -1.96
VPS50-216ENST00000484954 PCNX3Q9H6A9 2034 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 E9PI62 339 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 ATP6V0E1O15342 81 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 CDC123O75794 336 aaPredicted RBP2.82□□□□□ -1.96
VPS50-216ENST00000484954 MBD4O95243 580 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 RB1P06400 928 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 MMP9P14780 707 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 PRLRP16471 622 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 CEBPBP17676 345 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 AZU1P20160 251 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 ZNF10P21506 573 aaPredicted RBP2.82□□□□□ -1.96
VPS50-216ENST00000484954 HADHAP40939 763 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 SNX16P57768 344 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 SNRPEP62304 92 aaKnown RBP2.82□□□□□ -1.96
VPS50-216ENST00000484954 KCNJ10P78508 379 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 SETQ01105 290 aaPredicted RBP2.82□□□□□ -1.96
VPS50-216ENST00000484954 PLA2G7Q13093 441 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 HNRNPDQ14103 355 aaKnown RBP2.82□□□□□ -1.96
VPS50-216ENST00000484954 RRS1Q15050 365 aaKnown RBP2.82□□□□□ -1.96
VPS50-216ENST00000484954 FAM98BQ52LJ0 330 aaKnown RBP2.82□□□□□ -1.96
VPS50-216ENST00000484954 GORABQ5T7V8 394 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 GALNT5Q7Z7M9 940 aa2.82□□□□□ -1.96
VPS50-216ENST00000484954 AACSQ86V21 672 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms