RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 NKX2-8O15522 239 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 MAFKO60675 156 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 LRCH4O75427 683 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 STK17BO94768 372 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 PEX11BO96011 259 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 FTLP02792 175 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 MYBL1P10243 752 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 GZMAP12544 262 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 GP1BBP13224 206 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 TCN2P20062 427 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 RPL10P27635 214 aaKnown RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 MAPK9P45984 424 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 MECP2P51608 486 aaKnown RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 LSAMPQ13449 338 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 NFATC2Q13469 925 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 KIR2DS5Q14953 304 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 ASIC2Q16515 512 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 SMTNL2Q2TAL5 461 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 LACTB2Q53H82 288 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 TMEM177Q53S58 311 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 CYP4V2Q6ZWL3 525 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 CHST15Q7LFX5 561 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 OVCH1Q7RTY7 1134 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 ARHGAP22Q7Z5H3 698 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 IRF2BP2Q7Z5L9 587 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 POLNQ7Z5Q5 900 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 TECPR1Q7Z6L1 1165 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 TRIM74Q86UV6 250 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 ZNF761Q86XN6 746 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 PLXDC1Q8IUK5 500 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 LRRC49Q8IUZ0 686 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 TP53INP2Q8IXH6 220 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 RAVER1Q8IY67 606 aaKnown RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 PGBD5Q8N414 524 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 ESX1Q8N693 406 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 BMPERQ8N8U9 685 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 PIH1D2Q8WWB5 315 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 STARD8Q92502 1023 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 HSPH1Q92598 858 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 SCAMP4Q969E2 229 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 FBXW5Q969U6 566 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 ZNF653Q96CK0 615 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 CSPG4P5Q96PW8 444 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 CTRCQ99895 268 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 HERPUD2Q9BSE4 406 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 RIOK2Q9BVS4 552 aaKnown RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 POLR1EQ9GZS1 481 aaKnown RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 IPPKQ9H8X2 491 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 RMI1Q9H9A7 625 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 NT5MQ9NPB1 228 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 ZNF71Q9NQZ8 489 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 VPS18Q9P253 973 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 CNOT8Q9UFF9 292 aaKnown RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 FBXL7Q9UJT9 491 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 G3BP2Q9UN86 482 aaKnown RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 PLEKHM1Q9Y4G2 1056 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 TMEM184BQ9Y519 407 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-207ENST00000483407 KCTD3Q9Y597 815 aa5.8□□□□□ -1.48
CSDE1-207ENST00000483407 UNC13CQ8NB66 2214 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 MYO9AB2RTY4 2548 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 A0A0J9YYE9 177 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 LOC101059948A0A1B0GTJ6 334 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 CCDC66A2RUB6 948 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 LRRC53A6NM62 1247 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 MKRN2OSH3BPM6 223 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 SNX2O60749 519 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 SOD1P00441 154 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 TRBC1P01850 177 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 PDHA1P08559 390 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 ACP5P13686 325 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 F3P13726 295 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 GRK2P25098 689 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 IL1R2P27930 398 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 OAS2P29728 719 aaKnown RBP5.79□□□□□ -1.48
CSDE1-207ENST00000483407 GRK3P35626 688 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 STAT5AP42229 794 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 STC1P52823 247 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 RPL26P61254 145 aaKnown RBP5.79□□□□□ -1.48
CSDE1-207ENST00000483407 RPL11P62913 178 aaKnown RBP5.79□□□□□ -1.48
CSDE1-207ENST00000483407 FOXM1Q08050 763 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 KLHL30Q0D2K2 578 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 KLRB1Q12918 225 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 LAPTM5Q13571 262 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 PIGHQ14442 188 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-207ENST00000483407 KRT81Q14533 505 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 PTPRRQ15256 657 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 IGFBP7Q16270 282 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 STX1AQ16623 288 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 SKOR2Q2VWA4 1001 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-207ENST00000483407 DEFB109BQ30KR1 87 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 FILIP1LQ4L180 1135 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 CCDC122Q5T0U0 273 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 HLA-DQA1Q5Y7H0 255 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 TIGD7Q6NT04 549 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-207ENST00000483407 IYDQ6PHW0 289 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 RFLNAQ6ZTI6 216 aa5.79□□□□□ -1.48
CSDE1-207ENST00000483407 PHYKPLQ8IUZ5 450 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms