RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 ASTE1Q2TB18 679 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 SIRPB2Q5JXA9 342 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 GPRC6AQ5T6X5 926 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 LYPLAL1Q5VWZ2 237 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 KDELC1Q6UW63 502 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 FAM151BQ6UXP7 276 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 KMT5CQ86Y97 462 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 RFX6Q8HWS3 928 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 D2HGDHQ8N465 521 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 DDHD1Q8NEL9 900 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 DTX3LQ8TDB6 740 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 BRSK1Q8TDC3 778 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 MR1Q95460 341 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 TEKT5Q96M29 485 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 TTC25Q96NG3 672 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 CD180Q99467 661 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 TUBB2BQ9BVA1 445 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 MAK16Q9BXY0 300 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 ZCCHC2Q9C0B9 1178 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 TRABDQ9H4I3 376 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 UGT1A7Q9HAW7 530 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 UGT1A10Q9HAW8 530 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 UGT1A8Q9HAW9 530 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 IMP3Q9NV31 184 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 SNX7Q9UNH6 387 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 CSAG2Q9Y5P2 127 aa9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 CFAP20Q9Y6A4 193 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-210ENST00000481231 PKDREJQ9NTG1 2253 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 LOC285095A0A1B0GVY8 99 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 UBA6A0AVT1 1052 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 OR2AG2A6NM03 316 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 GAPDHSO14556 408 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 BUD23O43709 281 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 CPNE3O75131 537 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 SCRG1O75711 98 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 STSP08842 583 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 TMEM253P0C7T8 217 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 NFKB1P19838 968 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 PBLDP30039 288 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 SPAM1P38567 509 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 ARCN1P48444 511 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 VAV2P52735 878 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 TPM4P67936 248 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 GPS2Q13227 327 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 XRCC4Q13426 336 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 GPR19Q15760 415 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 PPP2R5EQ16537 467 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 ZNF630Q2M218 657 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 VWA2Q5GFL6 755 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 LDLRAP1Q5SW96 308 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 FNBP1LQ5T0N5 605 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 LRRC38Q5VT99 294 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 METRNLQ641Q3 311 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 LCN10Q6JVE6 187 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 DUS1LQ6P1R4 473 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 TMEM220Q6QAJ8 160 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 MFSD7Q6UXD7 560 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 BNC2Q6ZN30 1099 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 BPHLQ86WA6 291 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 TMEM126BQ8IUX1 230 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 PARP9Q8IXQ6 854 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 SLC25A41Q8N5S1 370 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 ZBTB2Q8N680 514 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 BEND7Q8N7W2 519 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 ENDOVQ8N8Q3 282 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 TMEM102Q8N9M5 508 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 SLC38A9Q8NBW4 561 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 SPDYE1Q8NFV5 336 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 SLC35G2Q8TBE7 412 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 BLOC1S5Q8TDH9 187 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 GRHL3Q8TE85 626 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 NAT14Q8WUY8 206 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 RNF25Q96BH1 459 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 ZNF501Q96CX3 271 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 OXNAD1Q96HP4 312 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 PPM1MQ96MI6 270 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 REPIN1Q9BWE0 567 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 WWP1Q9H0M0 922 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 CHST8Q9H2A9 424 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 ZBTB20Q9HC78 741 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 HRASLS2Q9NWW9 162 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 IL17CQ9P0M4 197 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 IFNKQ9P0W0 207 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 C5AR2Q9P296 337 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 SAE1Q9UBE0 346 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 FAM153AQ9UHL3 310 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 SPTBP11277 2137 aa9.17□□□□□ -0.94
SMARCE1-210ENST00000481231 GLYATL1P3A0A0U1RQE8 302 aa9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 A0A1B0GUH1 482 aa9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 OR6C74A6NCV1 312 aa9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 MASP2O00187 686 aa9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 ZBTB11O95625 1053 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 EPOP01588 193 aa9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 TNNT1P13805 278 aa9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 CD1EP15812 388 aa9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 PECAM1P16284 738 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 SSTR2P30874 369 aa9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 NR2C2P49116 596 aa9.16□□□□□ -0.94
SMARCE1-210ENST00000481231 KPNA2P52292 529 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms