RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PRSS44E7EML9 344 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 MASP2O00187 686 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 LRRTM2O43300 516 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 ZNF749O43361 778 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 PROSCO94903 275 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 KRT1P04264 644 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 CYP1A2P05177 515 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 FAM228BP0C875 321 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 PVRP15151 417 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 ST6GAL1P15907 406 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 KDELR1P24390 212 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 ITGA3P26006 1051 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 CA5AP35218 305 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 ARSEP51690 589 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 DMPKQ09013 629 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 MESDQ14696 234 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 PDK1Q15118 436 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 CYP2A13Q16696 494 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 LONRF2Q1L5Z9 754 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 DEFB110Q30KQ9 67 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 ANO6Q4KMQ2 910 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 SIRPB2Q5JXA9 342 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 GPRC6AQ5T6X5 926 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 IRAK1BP1Q5VVH5 260 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 ALKBH5Q6P6C2 394 aaKnown RBP6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 DAAM2Q86T65 1068 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 TICAM1Q8IUC6 712 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 CFAP206Q8IYR0 622 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 GLIS1Q8NBF1 620 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 IPMKQ8NFU5 416 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 FAM71BQ8TC56 605 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 UBE2Q2Q8WVN8 375 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 LCN9Q8WX39 176 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 CTNNBL1Q8WYA6 563 aaPredicted RBP6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 RAPGEF5Q92565 580 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 DCUN1D1Q96GG9 259 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 RBM41Q96IZ5 413 aaKnown RBP6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 RNF157Q96PX1 679 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 RANBP9Q96S59 729 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 FSD1LQ9BXM9 530 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 HSD3B7Q9H2F3 369 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 KIR3DX1Q9H7L2 352 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 GLOD4Q9HC38 313 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 IL26Q9NPH9 171 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 LATS2Q9NRM7 1088 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 LMBRD1Q9NUN5 540 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 TXLNGQ9NUQ3 528 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 SEMA5BQ9P283 1151 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 C5AR2Q9P296 337 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 KLHL8Q9P2G9 620 aaPredicted RBP6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 IFT80Q9P2H3 777 aaPredicted RBP6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 BTRCQ9Y297 605 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 GTF3C3Q9Y5Q9 886 aa6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 BZW2Q9Y6E2 419 aaKnown RBP6.49□□□□□ -1.37
RTFDC1-206ENST00000477485 CCDC66A2RUB6 948 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 MGAT4DA6NG13 374 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 MATN2O00339 956 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 IFRD1O00458 451 aaPredicted RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 BTN3A1O00481 513 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 STX7O15400 261 aaKnown RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 HNRNPRO43390 633 aaKnown RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 KLHL41O60662 606 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 ALOX12BO75342 701 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 OR2B3O76000 313 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 IPO13O94829 963 aaKnown RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 PRAMEF1O95521 474 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 IGHEP01854 428 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 SERPING1P05155 500 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 UQCRHP07919 91 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 HBQ1P09105 142 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 RALBP11234 206 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 NFKB1P19838 968 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 NDUFS1P28331 727 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 RORAP35398 523 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 HMGCLP35914 325 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 CHRNA4P43681 627 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 WNT3AP56704 352 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 FOXL2P58012 376 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 TMPRSS15P98073 1019 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 TYRO3Q06418 890 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 CDC16Q13042 620 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 PTPRCAPQ14761 206 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 MYBPC3Q14896 1274 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 HIF1AQ16665 826 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 DCAF10Q5QP82 559 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 ZDHHC20Q5W0Z9 365 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 METRNLQ641Q3 311 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 ZNF517Q6ZMY9 492 aaPredicted RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 FJX1Q86VR8 437 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 CARFQ8N187 725 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 LILRA3Q8N6C8 439 aaPredicted RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 PLD5Q8N7P1 536 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 DDHD1Q8NEL9 900 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 ACVR1CQ8NER5 493 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 FAF2Q96CS3 445 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 MAGEB10Q96LZ2 347 aaPredicted RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 RMDN2Q96LZ7 410 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 LRFN5Q96NI6 719 aa6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 NAP1L5Q96NT1 182 aaPredicted RBP6.48□□□□□ -1.37
RTFDC1-206ENST00000477485 IP6K3Q96PC2 410 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms