RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 MARK3P27448 753 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 CDH13P55290 713 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 UBXN2AP68543 259 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 CDK3Q00526 305 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 SNAPC1Q16533 368 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 NFE4Q86UQ8 179 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 TMEM173Q86WV6 379 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-211ENST00000476215 KCTD6Q8NC69 237 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 OR2AJ1Q8NGZ0 328 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 TRMT61BQ9BVS5 477 aaKnown RBP4.67□□□□□ -1.66
PTCD3-211ENST00000476215 FNDC11Q9BVV2 318 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 GOLPH3LQ9H4A5 285 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 TCF7L2Q9NQB0 619 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 ZFP57Q9NU63 452 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 CRNNQ9UBG3 495 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-211ENST00000476215 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.67□□□□□ -1.661e-10■□□□□ 10.5
PTCD3-211ENST00000476215 SPIN1Q9Y657 262 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-211ENST00000476215 GREB1LQ9C091 1923 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-211ENST00000476215 ZNF541Q9H0D2 1346 aa4.67□□□□□ -1.66
PTCD3-211ENST00000476215 ELOVL7A1L3X0 281 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 HEPACAM2A8MVW5 462 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 BMPR1BO00238 502 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 TSPAN1O60635 241 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 DNTTP04053 509 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 CBLP22681 906 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 CAPZA2P47755 286 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 NR1D2Q14995 579 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 CBWD6Q4V339 395 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 CBWD3Q5JTY5 395 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 SLC30A6Q6NXT4 461 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 CIARTQ8N365 385 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-211ENST00000476215 LMNTD1Q8N9Z9 388 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 L3MBTL4Q8NA19 623 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 INPP4AQ96PE3 977 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-211ENST00000476215 MS4A10Q96PG2 267 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 OLFM1Q99784 485 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 ABHD6Q9BV23 337 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 TXLNGYQ9BZA5 131 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 DPAGT1Q9H3H5 408 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 TBC1D17Q9HA65 648 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 APOBEC3GQ9HC16 384 aaKnown RBP4.66□□□□□ -1.66
PTCD3-211ENST00000476215 ANAPC2Q9UJX6 822 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 JRKLQ9Y4A0 524 aa4.66□□□□□ -1.66
PTCD3-211ENST00000476215 A0A1W2PPI3 338 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 MED19A0JLT2 244 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-211ENST00000476215 TIMM44O43615 452 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 FGF17O60258 216 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 PLOD3O60568 738 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 LMX1BO60663 402 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 ZNF432O94892 652 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 ACP2P11117 423 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 AIMP1Q12904 312 aaKnown RBP4.65□□□□□ -1.67
PTCD3-211ENST00000476215 SNTB1Q13884 538 aaKnown RBP4.65□□□□□ -1.67
PTCD3-211ENST00000476215 IL11RAQ14626 422 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 KIR2DS3Q14952 304 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 RASA2Q15283 850 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 RBBP5Q15291 538 aaKnown RBP4.65□□□□□ -1.67
PTCD3-211ENST00000476215 LETM2Q2VYF4 491 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 C9orf152Q5JTZ5 239 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 STPG1Q5TH74 334 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 Q6ZTC4 211 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 DENND5BQ6ZUT9 1274 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 SLC26A9Q7LBE3 791 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 KRT74Q7RTS7 529 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 SMIM29Q86T20 159 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 FAM114A1Q8IWE2 563 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 CRYBG2Q8N1P7 616 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 NME8Q8N427 588 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 PAPD5Q8NDF8 572 aaKnown RBP4.65□□□□□ -1.67
PTCD3-211ENST00000476215 TSPAN14Q8NG11 270 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 OR10S1Q8NGN2 331 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 CFAP61Q8NHU2 1237 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 ERP27Q96DN0 273 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 SPACA9Q96E40 222 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-211ENST00000476215 ALG14Q96F25 216 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 SCRN2Q96FV2 425 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 ST6GAL2Q96JF0 529 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 C17orf77Q96MU5 243 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 TFB2MQ9H5Q4 396 aaKnown RBP4.65□□□□□ -1.67
PTCD3-211ENST00000476215 OSER1Q9NX31 292 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 HAO2Q9NYQ3 351 aa4.65□□□□□ -1.67
PTCD3-211ENST00000476215 ANKUB1A6NFN9 424 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 P2RY10O00398 339 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 MED24O75448 989 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 PSMD10O75832 226 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 IGLV2-11P01706 119 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 PFKFB1P16118 471 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 NR1D1P20393 614 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 RPS18P62269 152 aaKnown RBP4.64□□□□□ -1.67
PTCD3-211ENST00000476215 PNRC1Q12796 327 aaPredicted RBP4.64□□□□□ -1.67
PTCD3-211ENST00000476215 MFAP5Q13361 173 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 ERMARDQ5T6L9 678 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 C6orf163Q5TEZ5 329 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 PLPPR4Q7Z2D5 763 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 CAMKMTQ7Z624 323 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 GPALPP1Q8IXQ4 340 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 EXD1Q8NHP7 514 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 ZNF473Q8WTR7 871 aaKnown RBP4.64□□□□□ -1.67
PTCD3-211ENST00000476215 TEKT4Q8WW24 435 aa4.64□□□□□ -1.67
PTCD3-211ENST00000476215 SECISBP2LQ93073 1101 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms