RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 OR4E2Q8NGC2 313 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 TFB1MQ8WVM0 346 aaKnown RBP13.62□□□□□ -0.23
CCDC78-209ENST00000474647 PNPLA2Q96AD5 504 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 IQCDQ96DY2 449 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 MRGPRX2Q96LB1 330 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 NLNQ9BYT8 704 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 KIR3DX1Q9H7L2 352 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 ACTR5Q9H9F9 607 aaPredicted RBP13.62□□□□□ -0.23
CCDC78-209ENST00000474647 LATS2Q9NRM7 1088 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 HACD3Q9P035 362 aa13.62□□□□□ -0.23
CCDC78-209ENST00000474647 SAE1Q9UBE0 346 aaPredicted RBP13.62□□□□□ -0.23
CCDC78-209ENST00000474647 LOC285095A0A1B0GVY8 99 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 MGAT4DA6NG13 374 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 ENO4A6NNW6 628 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 GAPDHSO14556 408 aaPredicted RBP13.61□□□□□ -0.23
CCDC78-209ENST00000474647 STX7O15400 261 aaKnown RBP13.61□□□□□ -0.23
CCDC78-209ENST00000474647 CBFA2T2O43439 604 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 TMEM253P0C7T8 217 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 OTX2P32243 289 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 PREPP48147 710 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 LMAN1P49257 510 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 PTPRCAPQ14761 206 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 LLGL1Q15334 1064 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 SLC1A5Q15758 541 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 SLC18A3Q16572 532 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 FAM198BQ6UWH4 519 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 MED25Q71SY5 747 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 MAMDC2Q7Z304 686 aaPredicted RBP13.61□□□□□ -0.23
CCDC78-209ENST00000474647 DAAM2Q86T65 1068 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 VSIG1Q86XK7 387 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 CARFQ8N187 725 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 TMEM102Q8N9M5 508 aaPredicted RBP13.61□□□□□ -0.23
CCDC78-209ENST00000474647 OR2L2Q8NH16 312 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 OR1L3Q8NH93 324 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 SLC35G2Q8TBE7 412 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 ZNF398Q8TD17 642 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 C19orf60Q96EN9 201 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 SGSM3Q96HU1 749 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 RMDN2Q96LZ7 410 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 LRFN5Q96NI6 719 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 FSD1LQ9BXM9 530 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 KLHL25Q9H0H3 589 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 PCMTD2Q9NV79 361 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 SMOXQ9NWM0 555 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 IFNKQ9P0W0 207 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 POMT2Q9UKY4 750 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 ACSL5Q9ULC5 683 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 HYOU1Q9Y4L1 999 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 COLEC10Q9Y6Z7 277 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 SVILO95425 2214 aa13.61□□□□□ -0.23
CCDC78-209ENST00000474647 C9J4A7 227 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 MAP3K7O43318 606 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 CLDN1O95832 211 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 PECAM1P16284 738 aaPredicted RBP13.6□□□□□ -0.23
CCDC78-209ENST00000474647 VARSP26640 1264 aaKnown RBP13.6□□□□□ -0.23
CCDC78-209ENST00000474647 NDUFS1P28331 727 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 RORAP35398 523 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 WASHC5Q12768 1159 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 NCF4Q15080 339 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 KAZNQ674X7 775 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 MFSD7Q6UXD7 560 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 BZW1Q7L1Q6 419 aaKnown RBP13.6□□□□□ -0.23
CCDC78-209ENST00000474647 ZC3H18Q86VM9 953 aaKnown RBP13.6□□□□□ -0.23
CCDC78-209ENST00000474647 RAB43Q86YS6 212 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 HPS6Q86YV9 775 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 CFAP206Q8IYR0 622 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 IQCKQ8N0W5 287 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 ZBTB2Q8N680 514 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 LILRA3Q8N6C8 439 aaPredicted RBP13.6□□□□□ -0.23
CCDC78-209ENST00000474647 DTX3LQ8TDB6 740 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 OXNAD1Q96HP4 312 aaPredicted RBP13.6□□□□□ -0.23
CCDC78-209ENST00000474647 SRMSQ9H3Y6 488 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 ASB8Q9H765 288 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 GRPEL1Q9HAV7 217 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 C1GALT1Q9NS00 363 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 ERRFI1Q9UJM3 462 aaPredicted RBP13.6□□□□□ -0.23
CCDC78-209ENST00000474647 PADI2Q9Y2J8 665 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 ARL5AQ9Y689 179 aa13.6□□□□□ -0.23
CCDC78-209ENST00000474647 MATN2O00339 956 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 AKR1B10O60218 316 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 CST8O60676 142 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 TPM3P06753 285 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 CAPN1P07384 714 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 ST6GAL1P15907 406 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 DCTP40126 519 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 ADCY2Q08462 1091 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 MPP3Q13368 585 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 PID1Q7Z2X4 250 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 ZNF567Q8N184 647 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 GLIS1Q8NBF1 620 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 ACVR1CQ8NER5 493 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 ZFPM2Q8WW38 1151 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 LCN9Q8WX39 176 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 HAUS1Q96CS2 278 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 SNRNP40Q96DI7 357 aaKnown RBP13.59□□□□□ -0.23
CCDC78-209ENST00000474647 TCTN2Q96GX1 697 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 FERD3LQ96RJ6 166 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 SMAD5Q99717 465 aaKnown RBP13.59□□□□□ -0.23
CCDC78-209ENST00000474647 ASF1BQ9NVP2 202 aa13.59□□□□□ -0.23
CCDC78-209ENST00000474647 DDX56Q9NY93 547 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms