RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 IL22Q9GZX6 179 aa11.26□□□□□ -0.61
CPNE1-222ENST00000473373 CASS4Q9NQ75 786 aa11.26□□□□□ -0.61
CPNE1-222ENST00000473373 EIF2B3Q9NR50 452 aaKnown RBP11.26□□□□□ -0.61
CPNE1-222ENST00000473373 CATSPERZQ9NTU4 200 aa11.26□□□□□ -0.61
CPNE1-222ENST00000473373 HRASLS2Q9NWW9 162 aa11.26□□□□□ -0.61
CPNE1-222ENST00000473373 SAMD15Q9P1V8 674 aa11.26□□□□□ -0.61
CPNE1-222ENST00000473373 TCAF1Q9Y4C2 921 aa11.26□□□□□ -0.61
CPNE1-222ENST00000473373 MN1Q10571 1320 aaPredicted RBP11.26□□□□□ -0.61
CPNE1-222ENST00000473373 PCM1Q15154 2024 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 C17orf113A0A1B0GUU1 675 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 OR6C74A6NCV1 312 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 MROH6A6NGR9 719 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 J3QKU1 62 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 PFDN6O15212 129 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 KDM1AO60341 852 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 RAD1O60671 282 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 GSTM1P09488 218 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 CDH3P22223 829 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 PREPP48147 710 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 NPY2RP49146 381 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 ARSDP51689 593 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 CRADDP78560 199 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 MC2RQ01718 297 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 RHDQ02161 417 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 GSTM4Q03013 218 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 MSLNQ13421 630 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-222ENST00000473373 TMED2Q15363 201 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 PPP1R7Q15435 360 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 SIX1Q15475 284 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-222ENST00000473373 KIAA1614Q5VZ46 1190 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 PTRHD1Q6GMV3 140 aaKnown RBP11.25□□□□□ -0.61
CPNE1-222ENST00000473373 CCDC137Q6PK04 289 aaKnown RBP11.25□□□□□ -0.61
CPNE1-222ENST00000473373 CERS6Q6ZMG9 384 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 ARHGAP22Q7Z5H3 698 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 LILRA3Q8N6C8 439 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-222ENST00000473373 OR4E2Q8NGC2 313 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 SKA2Q8WVK7 121 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-222ENST00000473373 LCN9Q8WX39 176 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 STAMBPL1Q96FJ0 436 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 MS4A14Q96JA4 679 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 LINC00615Q96LM1 132 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-222ENST00000473373 RMDN2Q96LZ7 410 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 RANBP9Q96S59 729 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 HGH1Q9BTY7 390 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 ULBP3Q9BZM4 244 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 B3GNT4Q9C0J1 378 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 SRMSQ9H3Y6 488 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 PDE7BQ9NP56 450 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 OGFRQ9NZT2 677 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 SLC2A6Q9UGQ3 507 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 LNPEPQ9UIQ6 1025 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 ASF1AQ9Y294 204 aa11.25□□□□□ -0.61
CPNE1-222ENST00000473373 TDRKHQ9Y2W6 561 aaKnown RBP11.25□□□□□ -0.61
CPNE1-222ENST00000473373 SNRNP200O75643 2136 aaKnown RBP11.24□□□□□ -0.61
CPNE1-222ENST00000473373 TRBV5-4A0A0C4DH59 114 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 AGAP14A8MT82 685 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 PYCARD-AS1I3L0S3 204 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 LIN7AO14910 233 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-222ENST00000473373 TOX3O15405 576 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-222ENST00000473373 KIF1CO43896 1103 aaKnown RBP11.24□□□□□ -0.61
CPNE1-222ENST00000473373 NDUFS3O75489 264 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 C9P02748 559 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 ANKRD34CP0C6C1 535 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 PAMP19021 973 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 POLR2CP19387 275 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-222ENST00000473373 MGAT1P26572 445 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 FOXN2P32314 431 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 TTPAP49638 278 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 PRKG2Q13237 762 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 TMTC4Q5T4D3 741 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 MICALCLQ6ZW33 695 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 PIANPQ8IYJ0 282 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 NLGN4XQ8N0W4 816 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 PHC3Q8NDX5 983 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 ACVR1CQ8NER5 493 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 NLGN4YQ8NFZ3 816 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-222ENST00000473373 UBXN4Q92575 508 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 TFGQ92734 400 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-222ENST00000473373 N4BP2L2Q92802 583 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-222ENST00000473373 PMEPA1Q969W9 287 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 OSBPL9Q96SU4 736 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 SLC7A5P2Q9GIP4 190 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 ZNF768Q9H5H4 540 aaKnown RBP11.24□□□□□ -0.61
CPNE1-222ENST00000473373 KIR3DX1Q9H7L2 352 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 GPN2Q9H9Y4 310 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-222ENST00000473373 FANCEQ9HB96 536 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 APMAPQ9HDC9 416 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 FBXO8Q9NRD0 319 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 CHRAC1Q9NRG0 131 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 SLC24A2Q9UI40 661 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 ACSL6Q9UKU0 697 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 PCDHGA3Q9Y5H0 932 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 ZNF462Q96JM2 2506 aa11.24□□□□□ -0.61
CPNE1-222ENST00000473373 IGLV3-16A0A075B6K0 115 aa11.23□□□□□ -0.61
CPNE1-222ENST00000473373 OR5K3A6NET4 321 aa11.23□□□□□ -0.61
CPNE1-222ENST00000473373 TLCD2A6NGC4 264 aa11.23□□□□□ -0.61
CPNE1-222ENST00000473373 PRR19A6NJB7 356 aa11.23□□□□□ -0.61
CPNE1-222ENST00000473373 GOLGA8MH3BSY2 632 aa11.23□□□□□ -0.61
CPNE1-222ENST00000473373 K7ENP7 123 aa11.23□□□□□ -0.61
CPNE1-222ENST00000473373 ERVH48-1M5A8F1 160 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms