RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 AP1M1Q9BXS5 423 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 PITPNM3Q9BZ71 974 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 LHPPQ9H008 270 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 HAUS2Q9NVX0 235 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 AMACRQ9UHK6 382 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 SH3BGRL2Q9UJC5 107 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 TMPRSS11EQ9UL52 423 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 TTLL3Q9Y4R7 772 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 CFAP20Q9Y6A4 193 aaKnown RBP11.62□□□□□ -0.55
LSM2-209ENST00000470083 AP1M2Q9Y6Q5 423 aa11.62□□□□□ -0.55
LSM2-209ENST00000470083 ALOX12BO75342 701 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 RNF8O76064 485 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 CLDN14O95500 239 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 ATP1A3P13637 1013 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 ST6GAL1P15907 406 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 CASP6P55212 293 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 NIPAL4Q0D2K0 466 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 TMEM115Q12893 351 aaPredicted RBP11.61□□□□□ -0.55
LSM2-209ENST00000470083 MFAP5Q13361 173 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 XRCC4Q13426 336 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 MAMLD1Q13495 774 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 SYCP1Q15431 976 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 CDSNQ15517 529 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 TPD52L1Q16890 204 aaPredicted RBP11.61□□□□□ -0.55
LSM2-209ENST00000470083 C1orf189Q5VU69 101 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 ISLR2Q6UXK2 745 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 MCOLN2Q8IZK6 566 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 OR1N1Q8NGS0 311 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 LMF1Q96S06 567 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 ADGRE3Q9BY15 652 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 ENKD1Q9H0I2 346 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 SEPT11Q9NVA2 429 aaKnown RBP11.61□□□□□ -0.55
LSM2-209ENST00000470083 CDYLQ9Y232 598 aa11.61□□□□□ -0.55
LSM2-209ENST00000470083 TMEM200CA6NKL6 621 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 POP7O75817 140 aaKnown RBP11.6□□□□□ -0.55
LSM2-209ENST00000470083 PRDX3P30048 256 aaKnown RBP11.6□□□□□ -0.55
LSM2-209ENST00000470083 ZNF165P49910 485 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 POLR2FP61218 127 aaKnown RBP11.6□□□□□ -0.55
LSM2-209ENST00000470083 RBPJQ06330 500 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 NFE2L1Q14494 772 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 ZFYVE27Q5T4F4 411 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 METRNLQ641Q3 311 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 LINC00696Q6ZRV3 163 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 CDHR3Q6ZTQ4 885 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 TMC3Q7Z5M5 1100 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 TGIF2LYQ8IUE0 185 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 TMEM151BQ8IW70 566 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 BRSK1Q8TDC3 778 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 NANOS1Q8WY41 292 aaKnown RBP11.6□□□□□ -0.55
LSM2-209ENST00000470083 ZNF653Q96CK0 615 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 TTC25Q96NG3 672 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 INSM2Q96T92 566 aaPredicted RBP11.6□□□□□ -0.55
LSM2-209ENST00000470083 TREX2Q9BQ50 279 aaPredicted RBP11.6□□□□□ -0.55
LSM2-209ENST00000470083 PARVAQ9NVD7 372 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 RBM22Q9NW64 420 aaKnown RBP eCLIP11.6□□□□□ -0.55
LSM2-209ENST00000470083 ABI3Q9P2A4 366 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 SEC14L3Q9UDX4 400 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 SHOC2Q9UQ13 582 aa11.6□□□□□ -0.55
LSM2-209ENST00000470083 PCM1Q15154 2024 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 TRAV17A0A0B4J275 112 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 GSAPA4D1B5 854 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 H3BMH7 237 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 SOCS6O14544 535 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 MATN3O15232 486 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 SLC19A2O60779 497 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 OR2B3O76000 313 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 SLC4A1P02730 911 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 CTSCP53634 463 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 CSNK1G2P78368 415 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 SLC9A5Q14940 896 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 NKAIN1Q4KMZ8 207 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 ATP13A5Q4VNC0 1218 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 FAAH2Q6GMR7 532 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 TIGD7Q6NT04 549 aaPredicted RBP11.59□□□□□ -0.55
LSM2-209ENST00000470083 BEND7Q8N7W2 519 aaPredicted RBP11.59□□□□□ -0.55
LSM2-209ENST00000470083 CHDHQ8NE62 594 aaPredicted RBP11.59□□□□□ -0.55
LSM2-209ENST00000470083 OR4E2Q8NGC2 313 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 GDAP1Q8TB36 358 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 FATE1Q969F0 183 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 C12orf66Q96MD2 445 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 NDC1Q9BTX1 674 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 ZCCHC2Q9C0B9 1178 aaKnown RBP11.59□□□□□ -0.55
LSM2-209ENST00000470083 XPO4Q9C0E2 1151 aaKnown RBP11.59□□□□□ -0.55
LSM2-209ENST00000470083 CXXC4Q9H2H0 198 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 MAGEE1Q9HCI5 957 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 NLRC4Q9NPP4 1024 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 SEMA3GQ9NS98 782 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 CDC23Q9UJX2 597 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 DNMT3AQ9Y6K1 912 aaPredicted RBP11.59□□□□□ -0.55
LSM2-209ENST00000470083 ABCA4P78363 2273 aa11.59□□□□□ -0.55
LSM2-209ENST00000470083 JMJD1CQ15652 2540 aa11.58□□□□□ -0.56
LSM2-209ENST00000470083 DYTNA2CJ06 578 aa11.58□□□□□ -0.56
LSM2-209ENST00000470083 TMEM191CA6NGB0 347 aa11.58□□□□□ -0.56
LSM2-209ENST00000470083 EPHB6O15197 1021 aa11.58□□□□□ -0.56
LSM2-209ENST00000470083 CRYABP02511 175 aaKnown RBP11.58□□□□□ -0.56
LSM2-209ENST00000470083 HLA-DQB2P05538 268 aa11.58□□□□□ -0.56
LSM2-209ENST00000470083 MMP2P08253 660 aa11.58□□□□□ -0.56
LSM2-209ENST00000470083 ESRRAP11474 423 aaPredicted RBP11.58□□□□□ -0.56
LSM2-209ENST00000470083 KLK2P20151 261 aa11.58□□□□□ -0.56
LSM2-209ENST00000470083 MST1P26927 711 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms