RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 COPG1Q9Y678 874 aaKnown RBP4.97□□□□□ -1.61
COPS3-204ENST00000462236 DIDO1Q9BTC0 2240 aaKnown RBP4.97□□□□□ -1.61
COPS3-204ENST00000462236 LRRK1Q38SD2 2015 aa4.97□□□□□ -1.61
COPS3-204ENST00000462236 SETD2Q9BYW2 2564 aaPredicted RBP4.97□□□□□ -1.61
COPS3-204ENST00000462236 CSMD1Q96PZ7 3565 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 TRAV19A0A0A6YYK7 116 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 ARHGEF35A5YM69 484 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 B9A039 149 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 PLK4O00444 970 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 CAPN9O14815 690 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 FLRT2O43155 660 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 NEMFO60524 1076 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 TSPAN3O60637 253 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 ZNF217O75362 1048 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 RNF8O76064 485 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 CTDNEP1O95476 244 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 PIGRP01833 764 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 APODP05090 189 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 PRKCGP05129 697 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 CLTAP09496 248 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 FDPSP14324 419 aaKnown RBP4.96□□□□□ -1.62
COPS3-204ENST00000462236 TACR3P29371 465 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 CDC25AP30304 524 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 STAT6P42226 847 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 PEX3P56589 373 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 FAM3BP58499 235 aaPredicted RBP4.96□□□□□ -1.62
COPS3-204ENST00000462236 SLC7A9P82251 487 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 SPAG1Q07617 926 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 ANKRD1Q15327 319 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 ALFQ53S48 1182 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 BMP2KLQ5H9B9 411 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 SDHAF4Q5VUM1 108 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 WSCD1Q658N2 575 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 DSTYKQ6XUX3 929 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 C1orf186Q6ZWK4 172 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 TMPRSS12Q86WS5 348 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 UEVLDQ8IX04 471 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 DEFB119Q8N690 84 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 ENDOVQ8N8Q3 282 aaKnown RBP4.96□□□□□ -1.62
COPS3-204ENST00000462236 TMEM161BQ8NDZ6 487 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 SPATA18Q8TC71 538 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 GABRG3Q99928 467 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 PRDM16Q9HAZ2 1276 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 ZDHHC4Q9NPG8 344 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 ASNSD1Q9NWL6 643 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 WSB2Q9NYS7 404 aaPredicted RBP4.96□□□□□ -1.62
COPS3-204ENST00000462236 KCND3Q9UK17 655 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 HEMK1Q9Y5R4 338 aaPredicted RBP4.96□□□□□ -1.62
COPS3-204ENST00000462236 LRBAP50851 2863 aa4.96□□□□□ -1.62
COPS3-204ENST00000462236 CRYBG3Q68DQ2 2970 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 SHANK1Q9Y566 2161 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 CCDC189A1A4V9 331 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 FAM149AA5PLN7 773 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 MYMKA6NI61 221 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 LRRC3CA6NJW4 275 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 TISP43B9A030 160 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 EIF3FO00303 357 aaPredicted RBP4.95□□□□□ -1.62
COPS3-204ENST00000462236 SLC16A4O15374 487 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 HOXC11O43248 304 aaPredicted RBP4.95□□□□□ -1.62
COPS3-204ENST00000462236 TNFSF14O43557 240 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 HEXIM1O94992 359 aaKnown RBP4.95□□□□□ -1.62
COPS3-204ENST00000462236 OAS1P00973 400 aaKnown RBP4.95□□□□□ -1.62
COPS3-204ENST00000462236 IGLV3-19P01714 112 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 CYP2A6P11509 494 aaPredicted RBP4.95□□□□□ -1.62
COPS3-204ENST00000462236 HLA-EP13747 358 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 CYP2F1P24903 491 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 CERS1P27544 350 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 MATKP42679 507 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 MAGEA11P43364 429 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 VAMP2P63027 116 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 HSF1Q00613 529 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 GAB1Q13480 694 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 ENPP2Q13822 863 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 CFAP221Q4G0U5 840 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 KIAA1614Q5VZ46 1190 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 JADE1Q6IE81 842 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 FAM171BQ6P995 826 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 ZNF788Q6ZQV5 615 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 RUFY3Q7L099 469 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 RD3Q7Z3Z2 195 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 ERICH1Q86X53 443 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 CD302Q8IX05 232 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 DCP1BQ8IZD4 617 aaKnown RBP4.95□□□□□ -1.62
COPS3-204ENST00000462236 C4orf32Q8N8J7 132 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 PNLDC1Q8NA58 520 aaKnown RBP4.95□□□□□ -1.62
COPS3-204ENST00000462236 CADM4Q8NFZ8 388 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 SPATA17Q96L03 361 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 CEP295NLQ96MC4 621 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 GATA5Q9BWX5 397 aaPredicted RBP4.95□□□□□ -1.62
COPS3-204ENST00000462236 GAREM1Q9H706 876 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 CHODLQ9H9P2 273 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 PDE11AQ9HCR9 933 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 ARL8BQ9NVJ2 186 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 BCCIPQ9P287 314 aaKnown RBP eCLIP4.95□□□□□ -1.62
COPS3-204ENST00000462236 PDP2Q9P2J9 529 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 CPSF3Q9UKF6 684 aaKnown RBP4.95□□□□□ -1.62
COPS3-204ENST00000462236 B3GNT3Q9Y2A9 372 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 PCDHGA1Q9Y5H4 931 aa4.95□□□□□ -1.62
COPS3-204ENST00000462236 PRRC2CQ9Y520 2896 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms