RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CLEC4AQ9UMR7 237 aa5.15□□□□□ -1.58
CSMD3-204ENST00000455883 C14orf166Q9Y224 244 aaKnown RBP5.15□□□□□ -1.58
CSMD3-204ENST00000455883 RGPD2P0DJD1 1756 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 AK1P00568 194 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 S100A8P05109 93 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 PDHA2P29803 388 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 BCL2A1Q16548 175 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 DCLRE1AQ6PJP8 1040 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 SPESP1Q6UW49 350 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 FAM20CQ8IXL6 584 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 MS4A15Q8N5U1 240 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ARRDC4Q8NCT1 418 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 DENND6BQ8NEG7 585 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 KCTD4Q8WVF5 259 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 PYDC1Q8WXC3 89 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF599Q96NL3 588 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 LGR6Q9HBX8 967 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 CYP4F12Q9HCS2 524 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 TRNAU1APQ9NX07 287 aaKnown RBP5.15□□□□□ -1.59
CSMD3-204ENST00000455883 CAPN14A8MX76 684 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 DENRO43583 198 aaKnown RBP5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ETV1P50549 477 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 SRPXP78539 464 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 IRF5Q13568 498 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF404Q494X3 552 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 DUS1LQ6P1R4 473 aaKnown RBP5.15□□□□□ -1.59
CSMD3-204ENST00000455883 NAPRTQ6XQN6 538 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 DAW1Q8N136 415 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 MARCH10Q8NA82 808 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-204ENST00000455883 OR8J3Q8NGG0 315 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 SPATA22Q8NHS9 363 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF606Q8WXB4 792 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 SEMA4CQ9C0C4 833 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ZNRF3Q9ULT6 936 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 DYSFO75923 2080 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 MEGF11A6BM72 1044 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 LIASO43766 372 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 TRAPPC2P0DI81 140 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 TRAPPC2BP0DI82 140 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 IL32P24001 234 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 RPS6P62753 249 aaKnown RBP5.15□□□□□ -1.59
CSMD3-204ENST00000455883 MED22Q15528 200 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 PAOXQ6QHF9 649 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 SYT12Q8IV01 421 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 HS6ST3Q8IZP7 471 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ASCC1Q8N9N2 400 aaKnown RBP5.15□□□□□ -1.59
CSMD3-204ENST00000455883 OR8H1Q8NGG4 311 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ING5Q8WYH8 240 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 LRRC4CQ9HCJ2 640 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 CLIC5Q9NZA1 410 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 TCRBV9S1A1TA0A576 114 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 SLC7A4O43246 635 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 IGFALSP35858 605 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 CERCAMQ5T4B2 595 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 CAPN13Q6MZZ7 669 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF367Q7RTV3 350 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ZSWIM2Q8NEG5 633 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 FBXO22Q8NEZ5 403 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 KBTBD7Q8WVZ9 684 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ELMO3Q96BJ8 720 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 NECAB3Q96P71 396 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-204ENST00000455883 OR52E6Q96RD3 313 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 DGCR6LQ9BY27 220 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 TMEM27Q9HBJ8 222 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 RDH8Q9NYR8 311 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 ABCD2Q9UBJ2 740 aa5.15□□□□□ -1.59
CSMD3-204ENST00000455883 HYKKA2RU49 373 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 BTBD17A6NE02 478 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF99A8MXY4 864 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 HSBP1L1C9JCN9 74 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 GTF2F2P13984 249 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 TAGLN2P37802 199 aaKnown RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 BUD31P41223 144 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 CXCR4P61073 352 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 BST1Q10588 318 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 MAMLD1Q13495 774 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 BAATQ14032 418 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 SWSAP1Q6NVH7 229 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 TRMT11Q7Z4G4 463 aaKnown RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 GLT6D1Q7Z4J2 308 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 CIR1Q86X95 450 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 MMAAQ8IVH4 418 aaKnown RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 KLHL36Q8N4N3 616 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 COLGALT1Q8NBJ5 622 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 BRSK1Q8TDC3 778 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 HASPINQ8TF76 798 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 SNAPC3Q92966 411 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 PURBQ96QR8 312 aaKnown RBP5.14□□□□□ -1.59
CSMD3-204ENST00000455883 NDUFAF4Q9P032 175 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 CPNE7Q9UBL6 633 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 ABCA2Q9BZC7 2435 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 WASHC1A8K0Z3 465 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 WASH3PC4AMC7 463 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 CLDN9O95484 217 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 C9P02748 559 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 RLN1P04808 185 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 TYRP14679 529 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 PRPS1L1P21108 318 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 ADORA2BP29275 332 aa5.14□□□□□ -1.59
CSMD3-204ENST00000455883 MECP2P51608 486 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms