RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 LCN9Q8WX39 176 aa23.1■■□□□ 1.29
LYSMD2-202ENST00000454181 HAUS1Q96CS2 278 aa23.1■■□□□ 1.29
LYSMD2-202ENST00000454181 CHP1Q99653 195 aa23.1■■□□□ 1.29
LYSMD2-202ENST00000454181 FERMT1Q9BQL6 677 aa23.1■■□□□ 1.29
LYSMD2-202ENST00000454181 SRMSQ9H3Y6 488 aa23.1■■□□□ 1.29
LYSMD2-202ENST00000454181 SERTAD3Q9UJW9 196 aa23.1■■□□□ 1.29
LYSMD2-202ENST00000454181 TCFL5Q9UL49 500 aa23.1■■□□□ 1.29
LYSMD2-202ENST00000454181 ARL5AQ9Y689 179 aa23.1■■□□□ 1.29
LYSMD2-202ENST00000454181 A6NL46 340 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 HACD1B0YJ81 288 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 GAPDHSO14556 408 aaPredicted RBP23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 ZNF185O15231 689 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 DDX3YO15523 660 aaKnown RBP23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 CBFA2T2O43439 604 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 PSTPIP1O43586 416 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 ANXA9O76027 345 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 SRP72O76094 671 aaKnown RBP23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 SORBS2O94875 1100 aaKnown RBP23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 AGTP01019 485 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 VAV2P52735 878 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 GEMP55040 296 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 RRADP55042 308 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 TAF1AQ15573 450 aaPredicted RBP23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 TAZQ16635 292 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 BCL7AQ4VC05 210 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 TFDP3Q5H9I0 405 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 PRAMEF17Q5VTA0 474 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 HIST2H2BCQ6DN03 193 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 MED25Q71SY5 747 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 CCDC50Q8IVM0 306 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 TMEM102Q8N9M5 508 aaPredicted RBP23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 ACVR1CQ8NER5 493 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 OR4K2Q8NGD2 314 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 PPM1MQ96MI6 270 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 FERD3LQ96RJ6 166 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 FICDQ9BVA6 458 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 MFRPQ9BY79 579 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 ACTR5Q9H9F9 607 aaPredicted RBP23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 CUEDC1Q9NWM3 386 aaPredicted RBP23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 CRLS1Q9UJA2 301 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 POMT2Q9UKY4 750 aa23.09■■□□□ 1.29
LYSMD2-202ENST00000454181 TMEM150CB9EJG8 249 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 CFAP99D6REC4 459 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 ZRANB2O95218 330 aaKnown RBP eCLIP23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 JMJD6Q6NYC1 403 aaPredicted RBP23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 ZNF449Q6P9G9 518 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 FDCSPQ8NFU4 85 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 ADAMTS17Q8TE56 1095 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 NAT14Q8WUY8 206 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 LINC00615Q96LM1 132 aaPredicted RBP23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 RMDN2Q96LZ7 410 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 QKIQ96PU8 341 aaKnown RBP eCLIP23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 CASS4Q9NQ75 786 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 ABHD10Q9NUJ1 306 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 GPR83Q9NYM4 423 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 LUZP4Q9P127 313 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 TNRC6AQ8NDV7 1962 aaKnown RBP23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 ICE1Q9Y2F5 2266 aa23.08■■□□□ 1.29
LYSMD2-202ENST00000454181 C5orf60A6NFR6 353 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 C9J4A7 227 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 IFRD1O00458 451 aaPredicted RBP23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 CEACAM4O75871 244 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 LCA5LO95447 670 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 AGXTP21549 392 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 CCDC181Q5TID7 509 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 ITPRIPL1Q6GPH6 555 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 LCN10Q6JVE6 187 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 DAAM2Q86T65 1068 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 SYTL1Q8IYJ3 562 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 RCOR2Q8IZ40 523 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 HM13Q8TCT9 377 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 HEXDCQ8WVB3 486 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 ULK4Q96C45 1275 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 FKBPLQ9UIM3 349 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 INTUQ9ULD6 942 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 PADI2Q9Y2J8 665 aa23.07■■□□□ 1.28
LYSMD2-202ENST00000454181 CCDC66A2RUB6 948 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 H7C0C1 242 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 CRTAMO95727 393 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 HBQ1P09105 142 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 PRDX3P30048 256 aaKnown RBP23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 ATP5OP48047 213 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 ABRQ12979 859 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 HOOK3Q86VS8 718 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 RAB43Q86YS6 212 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 OR1L3Q8NH93 324 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 N4BP2L2Q92802 583 aaPredicted RBP23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 SGSM3Q96HU1 749 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 RBM41Q96IZ5 413 aaKnown RBP23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 PCMTD2Q9NV79 361 aa23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.06■■□□□ 1.28
LYSMD2-202ENST00000454181 E7EQ34 232 aa23.05■■□□□ 1.28
LYSMD2-202ENST00000454181 SEMA7AO75326 666 aa23.05■■□□□ 1.28
LYSMD2-202ENST00000454181 ITGALP20701 1170 aa23.05■■□□□ 1.28
LYSMD2-202ENST00000454181 RORAP35398 523 aa23.05■■□□□ 1.28
LYSMD2-202ENST00000454181 PRPSAP1Q14558 356 aa23.05■■□□□ 1.28
LYSMD2-202ENST00000454181 TCEAL1Q15170 157 aa23.05■■□□□ 1.28
LYSMD2-202ENST00000454181 EIF2S3LQ2VIR3 472 aaKnown RBP23.05■■□□□ 1.28
LYSMD2-202ENST00000454181 LILRA3Q8N6C8 439 aaPredicted RBP23.05■■□□□ 1.28
LYSMD2-202ENST00000454181 PRR7Q8TB68 274 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms