RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ST13P5Q8NFI4 369 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 SLC35F5Q8WV83 523 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 FAM149B1Q96BN6 582 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 ZNF668Q96K58 619 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 C8orf48Q96LL4 319 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 KCNS3Q9BQ31 491 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 CCDC59Q9P031 241 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 YDJCA8MPS7 323 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 A8MX80 341 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 JCHAINP01591 159 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 ITGAMP11215 1152 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 ZNF37AP17032 561 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 MSH3P20585 1137 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 CA5AP35218 305 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 BAATQ14032 418 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 TRAPPC3LQ5T215 181 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 PTGR2Q8N8N7 351 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 RNF149Q8NC42 400 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 C2CD4AQ8NCU7 369 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 PPHLN1Q8NEY8 458 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 FAM162AQ96A26 154 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 NECTIN4Q96NY8 510 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 CYP2S1Q96SQ9 504 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 C1QTNF7Q9BXJ2 289 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 TRHDEQ9UKU6 1024 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 TMPRSS11EQ9UL52 423 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 NUP205Q92621 2012 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 DOCK5Q9H7D0 1870 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 LRRC14BA6NHZ5 514 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 E5RI56 91 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 SLITRK5O94991 958 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 SERPINF2P08697 491 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 CYP2A6P11509 494 aaPredicted RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 ERCC2P18074 760 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 DNAJB2P25686 324 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 MAGEA11P43364 429 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 RFX2P48378 723 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 EIF2B5Q13144 721 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 EFR3AQ14156 821 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 ATP6AP1LQ52LC2 224 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 ZNF789Q5FWF6 425 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 GPR158Q5T848 1215 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 UBE2Q1Q7Z7E8 422 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 CCDC190Q86UF4 302 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 TRIM48Q8IWZ4 208 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 DPF3Q92784 378 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 TSPAN17Q96FV3 270 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 CHCHD6Q9BRQ6 235 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 BBS2Q9BXC9 721 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 TIGARQ9NQ88 270 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 AIG1Q9NVV5 245 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 AGO1Q9UL18 857 aaKnown RBP9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 PKP3Q9Y446 797 aa9.28□□□□□ -0.92
SYNPO2-204ENST00000448416 STRCQ7RTU9 1775 aa9.27□□□□□ -0.92
SYNPO2-204ENST00000448416 A0A0U1RQS6 177 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 SLC12A8A0AV02 714 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 CCDC182A6NF36 153 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 PCP4L1A6NKN8 68 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 LACTBL1A8MY62 500 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 RGS5O15539 181 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 VPS4BO75351 444 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 OR2B3O76000 313 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 PAMP19021 973 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 TIE1P35590 1138 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 TAB1Q15750 504 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 BTBD16Q32M84 506 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 PRSS36Q5K4E3 855 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 EEF1DP3Q658K8 133 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 AADATQ8N5Z0 425 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 ZMIZ2Q8NF64 920 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 OR2T12Q8NG77 320 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 PDLIM5Q96HC4 596 aaKnown RBP9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 NSUN5Q96P11 429 aaKnown RBP9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 ACOX2Q99424 681 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 GLTPQ9NZD2 209 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 ZNF638Q14966 1978 aaKnown RBP9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 ATP6V1G2-DDX39BF2Z307 99 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 AKR7A2O43488 359 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 NPPAP01160 153 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 PDGFAP04085 211 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 CCNYL3P0C7X3 344 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 GBX1Q14549 363 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 DALRD3Q5D0E6 543 aaKnown RBP9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 ATF7IP2Q5U623 682 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 KANK2Q63ZY3 851 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 SCIMPQ6UWF3 145 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 DET1Q7L5Y6 550 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 SYVN1Q86TM6 617 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 IPCEF1Q8WWN9 437 aaPredicted RBP9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 FCGR1BQ92637 280 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 ISG20Q96AZ6 181 aaKnown RBP9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 OR51E2Q9H255 320 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 ZNF556Q9HAH1 456 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 PCDH10Q9P2E7 1040 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 M0R082 166 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 AGRPO00253 132 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 MRPS14O60783 128 aaKnown RBP9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 PRLP01236 227 aa9.27□□□□□ -0.93
SYNPO2-204ENST00000448416 AZGP1P25311 298 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms