RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 UBA1P22314 1058 aaKnown RBP4.07□□□□□ -1.76
HMGB3-203ENST00000430118 KCNA5P22460 613 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 RFC2P35250 354 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 MAGEA8P43361 318 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 CXCR3P49682 368 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 CLCN3P51790 818 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 RPS13P62277 151 aaKnown RBP4.07□□□□□ -1.76
HMGB3-203ENST00000430118 LPIN1Q14693 890 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 HYAL4Q2M3T9 481 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 SOWAHAQ2M3V2 549 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 CBWD6Q4V339 395 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 CBWD3Q5JTY5 395 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 ENTPD8Q5MY95 495 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 PRAMEF19Q5SWL8 479 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 BEND3Q5T5X7 828 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 FCRLBQ6BAA4 426 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 METTL2BQ6P1Q9 378 aaKnown RBP4.07□□□□□ -1.76
HMGB3-203ENST00000430118 PQLC2Q6ZP29 291 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 TAOK1Q7L7X3 1001 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 GLRX5Q86SX6 157 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 CAMK1DQ8IU85 385 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 VRK3Q8IV63 474 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 FOXP4Q8IVH2 680 aaPredicted RBP4.07□□□□□ -1.76
HMGB3-203ENST00000430118 CEP97Q8IW35 865 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 CEP57L1Q8IYX8 460 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 KRT222Q8N1A0 295 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 PARP16Q8N5Y8 322 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 TEX45Q8NA69 505 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 KDM1BQ8NB78 822 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 CMASQ8NFW8 434 aaPredicted RBP4.07□□□□□ -1.76
HMGB3-203ENST00000430118 GDAP1Q8TB36 358 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 LPGAT1Q92604 370 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 IGSF8Q969P0 613 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 METTL2AQ96IZ6 378 aaKnown RBP4.07□□□□□ -1.76
HMGB3-203ENST00000430118 PPP1R13BQ96KQ4 1090 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 FER1L6-AS2Q96M78 137 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 ACOX2Q99424 681 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 FAM118BQ9BPY3 351 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 NAA11Q9BSU3 229 aaPredicted RBP4.07□□□□□ -1.76
HMGB3-203ENST00000430118 PUS3Q9BZE2 481 aaKnown RBP4.07□□□□□ -1.76
HMGB3-203ENST00000430118 TASP1Q9H6P5 420 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 DDX4Q9NQI0 724 aaKnown RBP4.07□□□□□ -1.76
HMGB3-203ENST00000430118 CHMP5Q9NZZ3 219 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 RAP2CQ9Y3L5 183 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.07□□□□□ -1.76
HMGB3-203ENST00000430118 ZFHX4Q86UP3 3567 aa4.07□□□□□ -1.76
HMGB3-203ENST00000430118 IL16Q14005 1332 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 MYH2Q9UKX2 1941 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 A0A1B0GUL7 405 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 H0YHG0 523 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 WNT9BO14905 357 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 DUSP11O75319 330 aaKnown RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 CNMDO75829 334 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 SLU7O95391 586 aaKnown RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 ATP5BP06576 529 aaKnown RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 ASGR1P07306 291 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 TFPIP10646 304 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 VPREB1P12018 145 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 PRLRP16471 622 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 TCEA1P23193 301 aaKnown RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 PAX7P23759 505 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 CLCN5P51795 746 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 ECT2LQ008S8 904 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 SCN1BQ07699 218 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 STIM1Q13586 685 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 ZNF268Q14587 947 aaPredicted RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 MVPQ14764 893 aaKnown RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 ZSCAN26Q16670 478 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 PNLIPRP3Q17RR3 467 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 RABL6Q3YEC7 729 aaPredicted RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 MIDNQ504T8 468 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 LRIF1Q5T3J3 769 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 CES5AQ6NT32 575 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 SLC2A7Q6PXP3 512 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 MFSD6Q6ZSS7 791 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 MSANTD1Q6ZTZ1 278 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 FAM47EQ6ZV65 393 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 CENPQQ7L2Z9 268 aaPredicted RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 G2E3Q7L622 706 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 CAMKMTQ7Z624 323 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 NOXA1Q86UR1 476 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 ADHFE1Q8IWW8 467 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 UNC45BQ8IWX7 931 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 ZNF713Q8N859 430 aaPredicted RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 FAM184AQ8NB25 1140 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 Q8NFD4 153 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 OR14L1PQ8NHC6 308 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 PTERQ96BW5 349 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 MSI2Q96DH6 328 aaKnown RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 SIPA1Q96FS4 1042 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 ZNF419Q96HQ0 510 aaPredicted RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 ZNF570Q96NI8 536 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 PCGF1Q9BSM1 259 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 MOV10L1Q9BXT6 1211 aaKnown RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 B3GNT4Q9C0J1 378 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 DNAI2Q9GZS0 605 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 KLHL31Q9H511 634 aa4.06□□□□□ -1.76
HMGB3-203ENST00000430118 BICC1Q9H694 974 aaKnown RBP4.06□□□□□ -1.76
HMGB3-203ENST00000430118 OPA3Q9H6K4 179 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms