RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 GSAPA4D1B5 854 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 AGPSO00116 658 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 MMP2P08253 660 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 RARAP10276 462 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 TCF4P15884 667 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 FERP16591 822 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 PBLDP30039 288 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-206ENST00000426196 LMAN1P49257 510 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 KCNK10P57789 538 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 BECN1Q14457 450 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 KRT33BQ14525 404 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 ATP13A5Q4VNC0 1218 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 PRAMEF13Q5VWM6 474 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 IGFL2Q6UWQ7 119 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 PPP1R32Q7Z5V6 425 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 BEND7Q8N7W2 519 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-206ENST00000426196 TSGA13Q96PP4 275 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 TMPRSS11EQ9UL52 423 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 DNMT3AQ9Y6K1 912 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-206ENST00000426196 COLEC10Q9Y6Z7 277 aa13.75□□□□□ -0.21
HDAC6-206ENST00000426196 MAP1AP78559 2803 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-206ENST00000426196 TRGV8A0A0C4DH27 118 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 KCNN4O15554 427 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 CBSLP0DN79 551 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 ST6GAL1P15907 406 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 NDUFS1P28331 727 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 CBSP35520 551 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 DCDP81605 110 aaKnown RBP13.74□□□□□ -0.21
HDAC6-206ENST00000426196 PRKD1Q15139 912 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-206ENST00000426196 KRT31Q15323 416 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 ZFYVE27Q5T4F4 411 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 C1orf189Q5VU69 101 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 METRNLQ641Q3 311 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 ZNF295-AS1Q8N0V1 137 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 ANKRD20A12PQ8NF67 263 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 OR4E2Q8NGC2 313 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 PROKR1Q8TCW9 393 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 CPLX3Q8WVH0 158 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 MAGEB10Q96LZ2 347 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-206ENST00000426196 INSM2Q96T92 566 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-206ENST00000426196 AP1M1Q9BXS5 423 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 WWP1Q9H0M0 922 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 MRPL47Q9HD33 250 aaKnown RBP13.74□□□□□ -0.21
HDAC6-206ENST00000426196 FBXL4Q9UKA2 621 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 AP1M2Q9Y6Q5 423 aa13.74□□□□□ -0.21
HDAC6-206ENST00000426196 NCOA6Q14686 2063 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-206ENST00000426196 OR2AG2A6NM03 316 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 CCL21O00585 134 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 PCDH17O14917 1159 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 PRICKLE3O43900 615 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-206ENST00000426196 SLC35G4P0C7Q5 338 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 CTSCP53634 463 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 MMRN1Q13201 1228 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 GSE1Q14687 1217 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 PAFAH1B3Q15102 231 aaKnown RBP13.73□□□□□ -0.21
HDAC6-206ENST00000426196 ASIC2Q16515 512 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 LDLRAP1Q5SW96 308 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 NCBP2-AS2Q69YL0 99 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 RHBDD2Q6NTF9 364 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 RPUSD3Q6P087 351 aaKnown RBP13.73□□□□□ -0.21
HDAC6-206ENST00000426196 TMEM220Q6QAJ8 160 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 GFRALQ6UXV0 394 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 RASGEF1AQ8N9B8 481 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 NACC2Q96BF6 587 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 TRIB3Q96RU7 358 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 SRPK1Q96SB4 655 aaKnown RBP13.73□□□□□ -0.21
HDAC6-206ENST00000426196 PITPNM3Q9BZ71 974 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 SRMSQ9H3Y6 488 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 CLSTN2Q9H4D0 955 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 BPIFA1Q9NP55 256 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 SLC6A20Q9NP91 592 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 ACSL5Q9ULC5 683 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 CDYLQ9Y232 598 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 HEBP2Q9Y5Z4 205 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 FBN3Q75N90 2809 aa13.73□□□□□ -0.21
HDAC6-206ENST00000426196 OR2B3O76000 313 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 FTLP02792 175 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-206ENST00000426196 UMODP07911 640 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 CD1EP15812 388 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 MX2P20592 715 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 PRDX3P30048 256 aaKnown RBP13.72□□□□□ -0.21
HDAC6-206ENST00000426196 TDGF1P3P51864 188 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 SLC9A5Q14940 896 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 CCDC183Q5T5S1 534 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 TXNRD3NBQ6F5E7 133 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 XKRXQ6PP77 449 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 TMEM207Q6UWW9 146 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 CDHR3Q6ZTQ4 885 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 CCNYQ8ND76 341 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 ACVR1CQ8NER5 493 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 CHTF18Q8WVB6 975 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 LCN9Q8WX39 176 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 NR4A3Q92570 626 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 TRIM11Q96F44 468 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 LHPPQ9H008 270 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 TXLNGQ9NUQ3 528 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 MYO1AQ9UBC5 1043 aa13.72□□□□□ -0.21
HDAC6-206ENST00000426196 SNRNP200O75643 2136 aaKnown RBP13.72□□□□□ -0.21
HDAC6-206ENST00000426196 CCDC78A2IDD5 438 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms