RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 TTC1Q99614 292 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 ZSCAN5AQ9BUG6 496 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 TEX101Q9BY14 249 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 DRC3Q9H069 523 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 ILKAPQ9H0C8 392 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-202ENST00000425436 CCDC68Q9H2F9 335 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 SYTL2Q9HCH5 934 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 DNAJC28Q9NX36 388 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 PNMA8BQ9ULN7 279 aaPredicted RBP15.38■□□□□ 0.05
SHOX2-202ENST00000425436 DNAJC16Q9Y2G8 782 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 TMEM98Q9Y2Y6 226 aa15.38■□□□□ 0.05
SHOX2-202ENST00000425436 SPTY2D1-AS1A0A0U1RR47 76 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 F8W8V4 182 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 CACNB4O00305 520 aaPredicted RBP15.37■□□□□ 0.05
SHOX2-202ENST00000425436 SCAMP1O15126 338 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 GDF9O60383 454 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 MAGEC1O60732 1142 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 NDUFS3O75489 264 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 ALOX15P16050 662 aaPredicted RBP15.37■□□□□ 0.05
SHOX2-202ENST00000425436 NCALDP61601 193 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 XIAPP98170 497 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 PEX6Q13608 980 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 NFATC4Q14934 902 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 SPRED3Q2MJR0 410 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 DOK6Q6PKX4 331 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 ADAMTSL4Q6UY14 1074 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 DCP2Q8IU60 420 aaKnown RBP15.37■□□□□ 0.05
SHOX2-202ENST00000425436 SLC22A9Q8IVM8 553 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.37■□□□□ 0.05
SHOX2-202ENST00000425436 TSACCQ96A04 125 aaPredicted RBP15.37■□□□□ 0.05
SHOX2-202ENST00000425436 HIC2Q96JB3 615 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 TMEM237Q96Q45 408 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 CDH19Q9H159 772 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 GAREM1Q9H706 876 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 MRPL40Q9NQ50 206 aaKnown RBP15.37■□□□□ 0.05
SHOX2-202ENST00000425436 PHPT1Q9NRX4 125 aaPredicted RBP15.37■□□□□ 0.05
SHOX2-202ENST00000425436 GPR27Q9NS67 375 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 MARCH4Q9P2E8 410 aaPredicted RBP15.37■□□□□ 0.05
SHOX2-202ENST00000425436 KLF15Q9UIH9 416 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 TMPRSS11EQ9UL52 423 aa15.37■□□□□ 0.05
SHOX2-202ENST00000425436 ZNF106Q9H2Y7 1883 aaKnown RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 OR51F1A6NGY5 319 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 ITM2AO43736 263 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 NPHS1O60500 1241 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 SRP72O76094 671 aaKnown RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 PRAMEF1O95521 474 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 PRSS56P0CW18 603 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 MYCLP1P12525 358 aaPredicted RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 FDXRP22570 491 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 HTR1BP28222 390 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 SERPINB3P29508 390 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 MC4RP32245 332 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 CDKN1CP49918 316 aaPredicted RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 ATXN3P54252 364 aaPredicted RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 ADARP55265 1226 aaKnown RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 PRKAA1Q13131 559 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 EIF2B5Q13144 721 aaKnown RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 PTK2BQ14289 1009 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 AASDHQ4L235 1098 aaPredicted RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 RBM20Q5T481 1227 aaKnown RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 ZDHHC20Q5W0Z9 365 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 CES4AQ5XG92 561 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 CERS6Q6ZMG9 384 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 ASRGL1Q7L266 308 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 RD3Q7Z3Z2 195 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 PIWIL4Q7Z3Z4 852 aaKnown RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 KIAA2013Q8IYS2 634 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 PNPLA1Q8N8W4 532 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 HEXDCQ8WVB3 486 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 FAM122AQ96E09 287 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 RILPQ96NA2 401 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 OLFM1Q99784 485 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 AARSD1Q9BTE6 412 aaKnown RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 GATA5Q9BWX5 397 aaPredicted RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 C20orf27Q9GZN8 174 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 ASB8Q9H765 288 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 IGSF5Q9NSI5 407 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 TAS2R13Q9NYV9 303 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 NCKIPSDQ9NZQ3 722 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 CPSF2Q9P2I0 782 aaKnown RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 NFKBIL1Q9UBC1 381 aaPredicted RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 VTI1BQ9UEU0 232 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 LNPEPQ9UIQ6 1025 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 MOSPD1Q9UJG1 213 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 RAP2CQ9Y3L5 183 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 OAS3Q9Y6K5 1087 aaKnown RBP15.36■□□□□ 0.05
SHOX2-202ENST00000425436 PLXNB3Q9ULL4 1909 aa15.36■□□□□ 0.05
SHOX2-202ENST00000425436 FAM186AA6NE01 2351 aa15.35■□□□□ 0.05
SHOX2-202ENST00000425436 TOR1BO14657 336 aa15.35■□□□□ 0.05
SHOX2-202ENST00000425436 MTX2O75431 263 aa15.35■□□□□ 0.05
SHOX2-202ENST00000425436 SLC25A14O95258 325 aaPredicted RBP15.35■□□□□ 0.05
SHOX2-202ENST00000425436 WISP3O95389 354 aaPredicted RBP15.35■□□□□ 0.05
SHOX2-202ENST00000425436 FUCA1P04066 466 aa15.35■□□□□ 0.05
SHOX2-202ENST00000425436 PYGLP06737 847 aa15.35■□□□□ 0.05
SHOX2-202ENST00000425436 SERPINA6P08185 405 aa15.35■□□□□ 0.05
SHOX2-202ENST00000425436 F7P08709 466 aaPredicted RBP15.35■□□□□ 0.05
SHOX2-202ENST00000425436 HOXC4P09017 264 aaPredicted RBP15.35■□□□□ 0.05
SHOX2-202ENST00000425436 CCDC166P0CW27 439 aa15.35■□□□□ 0.05
SHOX2-202ENST00000425436 KITP10721 976 aa15.35■□□□□ 0.05
SHOX2-202ENST00000425436 NQO1P15559 274 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms