RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TPI1P60174 286 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 HSF1Q00613 529 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 FKBP3Q00688 224 aaKnown RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 CACNG1Q06432 222 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF33BQ06732 778 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 NSUN2Q08J23 767 aaKnown RBP eCLIP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 SNTB1Q13884 538 aaKnown RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 GALNT3Q14435 633 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 RFTN1Q14699 578 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 LBRQ14739 615 aaKnown RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 C15orf59Q2T9L4 293 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 C2CD6Q53TS8 623 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF766Q5HY98 468 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 HIBCHQ6NVY1 386 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 CNSTQ6PJW8 725 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 KIRREL2Q6UWL6 708 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 ARSKQ6UWY0 536 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 ABRAXAS1Q6UWZ7 409 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 Q6ZPB1 254 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 SLFN11Q7Z7L1 901 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 CCDC71Q8IV32 467 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 SMYD4Q8IYR2 804 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 CARFQ8N187 725 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 PYROXD2Q8N2H3 581 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 CIARTQ8N365 385 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 CCDC185Q8N715 623 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF655Q8N720 491 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 FAM98AQ8NCA5 519 aaKnown RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 TMEM35BQ8NCS4 154 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 EHBP1Q8NDI1 1231 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 GPR150Q8NGU9 434 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 LILRB4Q8NHJ6 448 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 GDAP1Q8TB36 358 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 CCHCR1Q8TD31 782 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 NSMCE1Q8WV22 266 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 HAS2Q92819 552 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 NACC2Q96BF6 587 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 NAA15Q9BXJ9 866 aaKnown RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 FAM83DQ9H4H8 585 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 PDFQ9HBH1 243 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 METTL5Q9NRN9 209 aaKnown RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 FAM207AQ9NSI2 230 aaPredicted RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 TAS2R14Q9NYV8 317 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 PKD2L2Q9NZM6 624 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 SLC23A2Q9UGH3 650 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 DNPEPQ9ULA0 475 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 RNF6Q9Y252 685 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF835Q9Y2P0 537 aa6.1□□□□□ -1.43
SDCBP-203ENST00000424270 CFAP20Q9Y6A4 193 aaKnown RBP6.1□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF469Q96JG9 3925 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-203ENST00000424270 C1orf232A0A0U1RR37 186 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 OR5H15A6NDH6 313 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 FADS2P1A8MWK0 482 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 GPR89AB7ZAQ6 455 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 ZSCAN9O15535 394 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-203ENST00000424270 PHF1O43189 567 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-203ENST00000424270 SPRY1O43609 319 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-203ENST00000424270 ASNA1O43681 348 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 KLK8O60259 260 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 WISP2O76076 250 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 CDK14O94921 469 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 PGLSO95336 258 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 CLDN7O95471 211 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 HPP00738 406 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 MYL1P05976 194 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 GPR89BP0CG08 455 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 PVRP15151 417 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 EEF1DP29692 281 aaKnown RBP6.09□□□□□ -1.43
SDCBP-203ENST00000424270 PBLDP30039 288 aaPredicted RBP6.09□□□□□ -1.43
SDCBP-203ENST00000424270 UQCRC1P31930 480 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 RAB28P51157 221 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 CTSCP53634 463 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 DCAF7P61962 342 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 PTSQ03393 145 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 TRAF2Q12933 501 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 RPE65Q16518 533 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 DEFB110Q30KQ9 67 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 RAB6CQ53S08 254 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 ZNF789Q5FWF6 425 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 ARTNQ5T4W7 220 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 ENOSF1Q7L5Y1 443 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 CD163Q86VB7 1156 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 FAM20CQ8IXL6 584 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 PRSS58Q8IYP2 241 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 UMODL1-AS1Q8N2C9 162 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 CPSF7Q8N684 471 aaKnown RBP6.09□□□□□ -1.43
SDCBP-203ENST00000424270 OR11G2Q8NGC1 345 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 OR4E2Q8NGC2 313 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 FAM172AQ8WUF8 416 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 DMRTA2Q96SC8 542 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 TIMM29Q9BSF4 260 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 CRB3Q9BUF7 120 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 MENTQ9BUN1 341 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 PRR14Q9BWN1 585 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 AMBRA1Q9C0C7 1298 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 SLC39A8Q9C0K1 460 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 RAB6CQ9H0N0 254 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 NOD2Q9HC29 1040 aa6.09□□□□□ -1.43
SDCBP-203ENST00000424270 TRIM39Q9HCM9 518 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms