RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CCDC122Q5T0U0 273 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 ZNF658Q5TYW1 1059 aaPredicted RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 FAM69BQ5VUD6 431 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 GGNBP1Q5YKI7 109 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 HIST2H2BCQ6DN03 193 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 HIST2H2BDQ6DRA6 164 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 CRELD2Q6UXH1 353 aaPredicted RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 DLK2Q6UY11 383 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 KDM7AQ6ZMT4 941 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 PQLC2Q6ZP29 291 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 COPS6Q7L5N1 327 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 TAOK1Q7L7X3 1001 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 KIAA1328Q86T90 577 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 FOXP4Q8IVH2 680 aaPredicted RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 ARHGAP12Q8IWW6 846 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 IFT20Q8IY31 132 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 SPATA6LQ8N4H0 392 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 MREGQ8N565 214 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 OTUD6BQ8N6M0 293 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 NOA1Q8NC60 698 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 CREB3L4Q8TEY5 395 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 AENQ8WTP8 325 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 POMGNT1Q8WZA1 660 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 SECISBP2LQ93073 1101 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 CCDC47Q96A33 483 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 JAKMIP2Q96AA8 810 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 MED30Q96HR3 178 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 WDFY2Q96P53 400 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 ALS2CR12Q96Q35 445 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 OR1F2PQ96R84 312 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 C1QTNF5Q9BXJ0 243 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 TEX13AQ9BXU3 409 aaPredicted RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 ITPAQ9BY32 194 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 NACAP1Q9BZK3 213 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 CUEDC2Q9H467 287 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 THAP9Q9H5L6 903 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 PPP1R3EQ9H7J1 279 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 POLR1BQ9H9Y6 1135 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 C17orf75Q9HAS0 396 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 SLC28A3Q9HAS3 691 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 LY9Q9HBG7 655 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 SAMSN1Q9NSI8 373 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 RBM28Q9NW13 759 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 OCIAD1Q9NX40 245 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 SELENONQ9NZV5 590 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 SLC9A2Q9UBY0 812 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 PNMA2Q9UL42 364 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 TTC7AQ9ULT0 858 aaPredicted RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 CORO1CQ9ULV4 474 aaPredicted RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 GUCA1BQ9UMX6 200 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 ADAM18Q9Y3Q7 739 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 HYOU1Q9Y4L1 999 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 SNX9Q9Y5X1 595 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 MAU2Q9Y6X3 613 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 MYH1P12882 1939 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 ALS2Q96Q42 1657 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 EP400Q96L91 3159 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 ABCB11O95342 1321 aa2.65□□□□□ -1.99
VPS41-206ENST00000418457 PDS5AQ29RF7 1337 aaKnown RBP2.65□□□□□ -1.99
VPS41-206ENST00000418457 LRP5O75197 1615 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 COL16A1Q07092 1604 aaPredicted RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 KIF13BQ9NQT8 1826 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 A0A1B0GUA9 196 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 BICDL2A1A5D9 508 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 ANKRD18BA2A2Z9 1011 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 GOLGA6L10A6NI86 522 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 LIPT2A6NK58 231 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 HMGB1P1B2RPK0 211 aaPredicted RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 LAD1O00515 517 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 PES1O00541 588 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 SOCS6O14544 535 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 VCYO14598 125 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 PSMA7O14818 248 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 IFIT3O14879 490 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 PLRG1O43660 514 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 RANBP6O60518 1105 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 ZBED4O75132 1171 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 NDUFS7O75251 213 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 NDUFS3O75489 264 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 GAGE7O76087 117 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 PAPSS2O95340 614 aaPredicted RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 LCA5LO95447 670 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 FGFR1OPO95684 399 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 FTCDO95954 541 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 FAM107AO95990 144 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 RPN1P04843 607 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 GAGE12FP0CL80 117 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 GAGE12GP0CL81 117 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 GAGE12IP0CL82 117 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 MYL6BP14649 208 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 EZRP15311 586 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 ZNF12P17014 697 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 RRM1P23921 792 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 SSTR2P30874 369 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 HNRNPH3P31942 346 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 CCKARP32238 428 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 NF2P35240 595 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 KRT2P35908 639 aa2.64□□□□□ -1.99
VPS41-206ENST00000418457 LONP1P36776 959 aaKnown RBP2.64□□□□□ -1.99
VPS41-206ENST00000418457 MRPL12P52815 198 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms