RNA–Protein interactions for RNA: ENST00000415683.2

GTF3C2-203, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-203ENST00000415683 CACNA1HO95180 2353 aa4.79□□□□□ -1.64
GTF3C2-203ENST00000415683 ZDBF2Q9HCK1 2354 aa4.79□□□□□ -1.64
GTF3C2-203ENST00000415683 ZNF318Q5VUA4 2279 aa4.79□□□□□ -1.64
GTF3C2-203ENST00000415683 RIF1Q5UIP0 2472 aaKnown RBP4.79□□□□□ -1.64
GTF3C2-203ENST00000415683 TECTAO75443 2155 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PLXNA4Q9HCM2 1894 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TRBV23OR9-2A0A075B6M9 112 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 FAM237AA0A1B0GTK4 181 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 A0A1W2PPW3 197 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 FAM234BA2RU67 622 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 E9PI62 339 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 SPECC1L-ADORA2AF8WAN1 911 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 CLDN5O00501 218 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 DNALI1O14645 258 aaPredicted RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 RRP8O43159 456 aaKnown RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TMCC1O94876 653 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TNFRSF6BO95407 300 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 C4BPAP04003 597 aaKnown RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 FAM87AP0C7U9 286 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TRIM49P0CI25 452 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TRIM49CP0CI26 452 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 MBL2P11226 248 aaPredicted RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 NCF1P14598 390 aaPredicted RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 HMGA1P17096 107 aaKnown RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PRKCAP17252 672 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 CFL1P23528 166 aaKnown RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 FCARP24071 287 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PTAFRP25105 342 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 GTF2H1P32780 548 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TRHRP34981 398 aaPredicted RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PPP1R2P41236 205 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 IL12RB1P42701 662 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PRCPP42785 496 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 MAGEA9P43362 315 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 CXCL12P48061 93 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PPP3CCP48454 512 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 KCNC1P48547 511 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 GDI2P50395 445 aaKnown RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 BMXP51813 675 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 INHBCP55103 352 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PRAMEP78395 509 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 FKBP3Q00688 224 aaKnown RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 GAD2Q05329 585 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TAF10Q12962 218 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 ZNF177Q13360 481 aaPredicted RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 MSLNQ13421 630 aaPredicted RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 XRCC4Q13426 336 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 RUNX3Q13761 415 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 CBFBQ13951 182 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PON2Q15165 354 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PDGFRLQ15198 375 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 ZMYND11Q15326 602 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 CAMK4Q16566 473 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 EDRF1Q3B7T1 1238 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 LRRC23Q53EV4 343 aaPredicted RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TMEM177Q53S58 311 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 HSP90AA4PQ58FG1 418 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 ZNF628Q5EBL2 1059 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TMTC4Q5T4D3 741 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 RIPPLY2Q5TAB7 128 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 ANKRD40Q6AI12 368 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 SPOPLQ6IQ16 392 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PPP1R2P3Q6NXS1 205 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 FAM171BQ6P995 826 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 CYP20A1Q6UW02 462 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 OVCH1Q7RTY7 1134 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 VASH2Q86V25 355 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 KBTBD6Q86V97 674 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TPRA1Q86W33 373 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 RALGPS2Q86X27 583 aaPredicted RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 STX12Q86Y82 276 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 ZC3H7AQ8IWR0 971 aaKnown RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 REXO1L1PQ8IX06 675 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 SYCE1Q8N0S2 351 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 CADM3Q8N126 398 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PYROXD2Q8N2H3 581 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TXLNBQ8N3L3 684 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 POMGNT2Q8NAT1 580 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 POGLUT1Q8NBL1 392 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 CHST14Q8NCH0 376 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 B3GALNT2Q8NCR0 500 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 FBXL13Q8NEE6 735 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 PDZD8Q8NEN9 1154 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 SLC24A4Q8NFF2 622 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 OR8K5Q8NH50 307 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 SLC2A14Q8TDB8 520 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 SH3RF2Q8TEC5 729 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 KBTBD7Q8WVZ9 684 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 THRSPQ92748 146 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 HMCESQ96FZ2 354 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TCTN2Q96GX1 697 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 MEGF10Q96KG7 1140 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TMEM68Q96MH6 324 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 AIFM2Q9BRQ8 373 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 BTBD2Q9BX70 525 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 FRMD8P1Q9BZ68 369 aaPredicted RBP4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 OSBPL6Q9BZF3 934 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 GPR61Q9BZJ8 451 aa4.78□□□□□ -1.64
GTF3C2-203ENST00000415683 TRIM4Q9C037 500 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms