RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 NFS1Q9Y697 457 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 KIAA1551Q9HCM1 1747 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 NRXN2Q9P2S2 1712 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 TOGARAM1Q9Y4F4 1720 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 MAP2P11137 1827 aaKnown RBP2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 MUC3AQ02505 3323 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 MRC1P22897 1456 aa2.58□□□□□ -2
RNU6-1140P-201ENST00000410517 ADAMTSL1Q8N6G6 1762 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 VIRMAQ69YN4 1812 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 LAMA2P24043 3122 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 hCG_1809904A0A1W2PP81 198 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 A0A1W2PPE2 198 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 A0A1W2PR64 198 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 CPED1A4D0V7 1026 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 P4HA2O15460 535 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 KCNN4O15554 427 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 NDUFS4O43181 175 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 ZIC3O60481 467 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 RFPL2O75678 378 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 OR2C1O95371 312 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 CRYABP02511 175 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 AFPP02771 609 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 FYNP06241 537 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 IGHV4-30-4P0DP06 118 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 BDKRB2P30411 391 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 GARSP41250 739 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 LINC00205P59089 165 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 SNRPEP62304 92 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 AIMP1Q12904 312 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 GRAPQ13588 217 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 CTTNQ14247 550 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 MYBPC2Q14324 1141 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 MVPQ14764 893 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 MEP1AQ16819 746 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 MMEL1Q495T6 779 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 TMEM35AQ53FP2 167 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 SGO1Q5FBB7 561 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 GARNL3Q5VVW2 1013 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 PMS2CLQ68D20 193 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 KRT39Q6A163 491 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 INTS8Q75QN2 995 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 MTSS1LQ765P7 747 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 HAUS6Q7Z4H7 955 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 SDCCAG8Q86SQ7 713 aaPredicted RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 PIP4P1Q86T03 277 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 TSPAN33Q86UF1 283 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 NOXA1Q86UR1 476 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 ADHFE1Q8IWW8 467 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 SCYL3Q8IZE3 742 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 CCAR2Q8N163 923 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 PAPD5Q8NDF8 572 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF548Q8NEK5 533 aaPredicted RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 GRAPLQ8TC17 118 aaPredicted RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 INPP5DQ92835 1189 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 ZKSCAN4Q969J2 545 aaPredicted RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 IGSF8Q969P0 613 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 ERGIC1Q969X5 290 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 ORAI1Q96D31 301 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 MTERF3Q96E29 417 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 CFAP53Q96M91 514 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 CFAP57Q96MR6 1250 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 WDFY2Q96P53 400 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 OR2A14Q96R47 310 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 FIZ1Q96SL8 496 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 SEPHS2Q99611 448 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 EGFL8Q99944 293 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 SEMA3CQ99985 751 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 NEURL2Q9BR09 285 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 MSTO1Q9BUK6 570 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 UTP14AQ9BVJ6 771 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 MXD3Q9BW11 206 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 C1QTNF5Q9BXJ0 243 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 TM6SF1Q9BZW5 370 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 SPATC1LQ9H0A9 340 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 RAD21L1Q9H4I0 556 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 ZWILCHQ9H900 591 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 MRPL44Q9H9J2 332 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 BCCIPQ9P287 314 aaKnown RBP eCLIP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 DNAJB4Q9UDY4 337 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 CNOT8Q9UFF9 292 aaKnown RBP2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 ZNF148Q9UQR1 794 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 TRIM17Q9Y577 477 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 FAM169AQ9Y6X4 670 aa2.57□□□□□ -2
RNU6-1140P-201ENST00000410517 TIAM2Q8IVF5 1701 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 N4BP2Q86UW6 1770 aaPredicted RBP2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 SBF1O95248 1867 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 PIEZO1Q92508 2521 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 TRBC2A0A5B9 178 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 FAM90A8PA6NJQ4 464 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 LACTBL1A8MY62 500 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 H3BQ06 376 aaPredicted RBP2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 ATP2A1O14983 1001 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 WDR46O15213 610 aaKnown RBP2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 ZBTB43O43298 467 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 HSPA12AO43301 675 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 RGS14O43566 566 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 PLRG1O43660 514 aaKnown RBP2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 GGPS1O95749 300 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 CCDC175P0C221 793 aa2.56□□□□□ -2
RNU6-1140P-201ENST00000410517 FAM90A13PP0C7W8 464 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms