RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ERVPABLB-1P60509 514 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 PRKG2Q13237 762 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 KCNC3Q14003 757 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 GRB7Q14451 532 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 GBX1Q14549 363 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 AASDHQ4L235 1098 aaPredicted RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 C6orf136Q5SQH8 315 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 LRRC70Q7Z2Q7 622 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 ZSWIM9Q86XI8 627 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 NRSN1Q8IZ57 195 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 GLB1L3Q8NCI6 653 aaPredicted RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 OR2A12Q8NGT7 310 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 DNAJB8Q8NHS0 232 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 POP5Q969H6 163 aaKnown RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 VOPP1Q96AW1 172 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 RHBDF1Q96CC6 855 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 KCNA7Q96RP8 456 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 MYCBPQ99417 103 aaPredicted RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 EGFL8Q99944 293 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 FAM83CQ9BQN1 747 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 ZSCAN5AQ9BUG6 496 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 IPPKQ9H8X2 491 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 FBRSL1Q9HCM7 1045 aaKnown RBP13.34□□□□□ -0.27
LIMS1-205ENST00000410093 HCFC1R1Q9NWW0 138 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 WWOXQ9NZC7 414 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 ZNF225Q9UK10 706 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 ADAMTS6Q9UKP5 1117 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 SLC27A6Q9Y2P4 619 aa13.34□□□□□ -0.27
LIMS1-205ENST00000410093 VCANP13611 3396 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 NOTCH4Q99466 2003 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 TCRBV3S1A0A5B6 114 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 CCDC154A6NI56 674 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 OR7A17O14581 309 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 HOXC11O43248 304 aaPredicted RBP13.33□□□□□ -0.28
LIMS1-205ENST00000410093 SYNCRIPO60506 623 aaKnown RBP13.33□□□□□ -0.28
LIMS1-205ENST00000410093 ADH1CP00326 375 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 FTH1P02794 183 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 UGT2B4P06133 528 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 HIST1H2AGP0C0S8 130 aaPredicted RBP13.33□□□□□ -0.28
LIMS1-205ENST00000410093 PIM1P11309 404 aaPredicted RBP13.33□□□□□ -0.28
LIMS1-205ENST00000410093 BMP1P13497 986 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 ATP1B2P14415 290 aaPredicted RBP13.33□□□□□ -0.28
LIMS1-205ENST00000410093 UQCRBP14927 111 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 UGT1A6P19224 532 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 HIST1H2ADP20671 130 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 UGT1A1P22309 533 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 UGT1A4P22310 534 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 AOAHP28039 575 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 GKP32189 559 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 UGT1A3P35503 534 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 UGT1A5P35504 534 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 MS4A2Q01362 244 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 MED21Q13503 144 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 PTPRRQ15256 657 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 PUS10Q3MIT2 529 aaKnown RBP13.33□□□□□ -0.28
LIMS1-205ENST00000410093 GGTA1PQ4G0N0 100 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 LY6G5CQ5SRR4 150 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 TRIM46Q7Z4K8 759 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 TSPAN33Q86UF1 283 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 SPATA24Q86W54 205 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 DHFR2Q86XF0 187 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 AADATQ8N5Z0 425 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 DPP10Q8N608 796 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 TRAM1L1Q8N609 369 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 HIPK4Q8NE63 616 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 GATA6Q92908 595 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 LRRC58Q96CX6 371 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 TCEAL4Q96EI5 215 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 HIST1H2AHQ96KK5 128 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 KLHL32Q96NJ5 620 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 HIST1H2AJQ99878 128 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 H2AFJQ9BTM1 129 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 BOCQ9BWV1 1114 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 SLC12A9Q9BXP2 914 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 FAM83DQ9H4H8 585 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 IGFLR1Q9H665 355 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 PARVBQ9HBI1 364 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 CLDND1Q9NY35 253 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 PDP2Q9P2J9 529 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 B4GALT6Q9UBX8 382 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 RAB26Q9ULW5 256 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 EIF3LQ9Y262 564 aaKnown RBP13.33□□□□□ -0.28
LIMS1-205ENST00000410093 BTRCQ9Y297 605 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 DTNAQ9Y4J8 743 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 TIMM22Q9Y584 194 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 AP4S1Q9Y587 144 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 PRSS21Q9Y6M0 314 aa13.33□□□□□ -0.28
LIMS1-205ENST00000410093 SERTM1A2A2V5 107 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 UPK3BL1B0FP48 263 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 UPK3BL2E5RIL1 263 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 ARNTLO00327 626 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 STK16O75716 305 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 SORBS2O94875 1100 aaKnown RBP13.32□□□□□ -0.28
LIMS1-205ENST00000410093 CAPN1P07384 714 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 C1SP09871 688 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 ACPPP15309 386 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 CYP2A7P20853 494 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 JAK1P23458 1154 aa13.32□□□□□ -0.28
LIMS1-205ENST00000410093 POLR2JP52435 117 aaKnown RBP13.32□□□□□ -0.28
LIMS1-205ENST00000410093 EEFSECP57772 596 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms