RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ANKRD49Q8WVL7 239 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 ATL1Q8WXF7 558 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 RBCK1Q9BYM8 510 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 RAP2CQ9Y3L5 183 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 DTNAQ9Y4J8 743 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 BRCA2P51587 3418 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 SPAG17Q6Q759 2223 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 PIP5K1BO14986 540 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 HPCAP84074 193 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 TBL3Q12788 808 aaKnown RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 GTF2H2Q13888 395 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 TAF11Q15544 211 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 TJAP1Q5JTD0 557 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 GTF2H2CQ6P1K8 395 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 Q6ZS52 159 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 RAD51AP1Q96B01 352 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 RCN3Q96D15 328 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 TPD52L3Q96J77 140 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 CLPTM1LQ96KA5 538 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 GBP5Q96PP8 586 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 SNX6Q9UNH7 406 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 MTF2Q9Y483 593 aaPredicted RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 ANXA6P08133 673 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 HMGCLP35914 325 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 SPINT3P49223 89 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 CCR4P51679 360 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 IL23RQ5VWK5 629 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 FAM156AQ8NDB6 213 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 TWIST2Q8WVJ9 160 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 RERGQ96A58 199 aaPredicted RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 EXOSC8Q96B26 276 aaKnown RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 FAM120BQ96EK7 910 aaKnown RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 TCF12Q99081 682 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 MGME1Q9BQP7 344 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 CCDC90BQ9GZT6 254 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 FBRSL1Q9HCM7 1045 aaKnown RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 CCDC177Q9NQR7 707 aaPredicted RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 GID8Q9NWU2 228 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 C6orf203Q9P0P8 240 aaPredicted RBP11.2□□□□□ -0.62
SNX13-202ENST00000409604 SPACA6W5XKT8 324 aa11.2□□□□□ -0.62
SNX13-202ENST00000409604 EPOPA6NHQ4 379 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 A8MT66 165 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 SEMA4FO95754 770 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 S1PR4O95977 384 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 MT-ND1P03886 318 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 SLC9A5Q14940 896 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 EIF4HQ15056 248 aaKnown RBP11.19□□□□□ -0.62
SNX13-202ENST00000409604 PAGE2BQ5JRK9 111 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 LDLRAP1Q5SW96 308 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 FAAH2Q6GMR7 532 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 HSPA12BQ96MM6 686 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 ZNF641Q96N77 438 aaPredicted RBP11.19□□□□□ -0.62
SNX13-202ENST00000409604 MCMBPQ9BTE3 642 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 TRIT1Q9H3H1 467 aaKnown RBP11.19□□□□□ -0.62
SNX13-202ENST00000409604 SNX13Q9Y5W8 968 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 ZCWPW2A0A1B0GU75 182 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 GLOD5A6NK44 160 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 C2CD4DB7Z1M9 353 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 H0Y8X5 98 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 H7BY64 318 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 OGNP20774 298 aaKnown RBP11.19□□□□□ -0.62
SNX13-202ENST00000409604 CRATP43155 626 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 GPR33Q49SQ1 333 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 VPS26BQ4G0F5 336 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 LMNTD2Q8IXW0 634 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 VPS50Q96JG6 964 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 PRAP1Q96NZ9 151 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 PRDM6Q9NQX0 595 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 DGKBQ9Y6T7 804 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 ATP5HO75947 161 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 EPOP01588 193 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 KRT16P08779 473 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 GSCP56915 257 aaPredicted RBP11.19□□□□□ -0.62
SNX13-202ENST00000409604 ACAP2Q15057 778 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 ASTLQ6HA08 431 aaPredicted RBP11.19□□□□□ -0.62
SNX13-202ENST00000409604 KDELC1Q6UW63 502 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 TMEM135Q86UB9 458 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 KRT78Q8N1N4 520 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 VPS33AQ96AX1 596 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 CNDP1Q96KN2 507 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 MAGEE1Q9HCI5 957 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 NLE1Q9NVX2 485 aaPredicted RBP11.19□□□□□ -0.62
SNX13-202ENST00000409604 SARDHQ9UL12 918 aa11.19□□□□□ -0.62
SNX13-202ENST00000409604 QSOX1O00391 747 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 SOCS5O75159 536 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 MLYCDO95822 493 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 ALPPL2P10696 532 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 TSHRP16473 764 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 POU1F1P28069 291 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 CTSCP53634 463 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 HTRA4P83105 476 aaPredicted RBP11.18□□□□□ -0.62
SNX13-202ENST00000409604 TDGQ13569 410 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 RALGPS2Q86X27 583 aaPredicted RBP11.18□□□□□ -0.62
SNX13-202ENST00000409604 DSELQ8IZU8 1212 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 CLEC4FQ8N1N0 589 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 LILRA3Q8N6C8 439 aaPredicted RBP11.18□□□□□ -0.62
SNX13-202ENST00000409604 SPPL2AQ8TCT8 520 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 ATXN2LQ8WWM7 1075 aaKnown RBP11.18□□□□□ -0.62
SNX13-202ENST00000409604 MACROD1Q9BQ69 325 aa11.18□□□□□ -0.62
SNX13-202ENST00000409604 PLA2G2FQ9BZM2 168 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms