RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 KLHL30Q0D2K2 578 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 KRT33BQ14525 404 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 HADHQ16836 314 aaKnown RBP16.18■□□□□ 0.18
CHMP3-203ENST00000409225 LDLRAP1Q5SW96 308 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 FNBP1LQ5T0N5 605 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 C1orf189Q5VU69 101 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 DET1Q7L5Y6 550 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 NT5DC3Q86UY8 548 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 PQLC3Q8N755 202 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 ZFPM2Q8WW38 1151 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 ZNF830Q96NB3 372 aaPredicted RBP16.18■□□□□ 0.18
CHMP3-203ENST00000409225 AGAP3Q96P47 875 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 ZNF670Q9BS34 389 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 XPO4Q9C0E2 1151 aaKnown RBP16.18■□□□□ 0.18
CHMP3-203ENST00000409225 ISCUQ9H1K1 167 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 IL26Q9NPH9 171 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 ATP13A2Q9NQ11 1180 aa16.18■□□□□ 0.18
CHMP3-203ENST00000409225 LRRC10BA6NIK2 292 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 MAP3K7O43318 606 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 SNRPB2P08579 225 aaKnown RBP16.17■□□□□ 0.18
CHMP3-203ENST00000409225 HBQ1P09105 142 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 SKILP12757 684 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 PVRP15151 417 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 PPIDQ08752 370 aaKnown RBP16.17■□□□□ 0.18
CHMP3-203ENST00000409225 GSE1Q14687 1217 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 SLC9A5Q14940 896 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 PPP2R5EQ16537 467 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 CYP2A13Q16696 494 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 GPRC6AQ5T6X5 926 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 CCDC70Q6NSX1 233 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 FAM151BQ6UXP7 276 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 APTXQ7Z2E3 356 aaKnown RBP16.17■□□□□ 0.18
CHMP3-203ENST00000409225 GDF7Q7Z4P5 450 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 PPP1R32Q7Z5V6 425 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 CPNE8Q86YQ8 564 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 SPATA22Q8NHS9 363 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 DNAJB14Q8TBM8 379 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 PPP4R1Q8TF05 950 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 NAT14Q8WUY8 206 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 FAR1Q8WVX9 515 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 CNDP1Q96KN2 507 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 GBP5Q96PP8 586 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 THAP2Q9H0W7 228 aa16.17■□□□□ 0.18
CHMP3-203ENST00000409225 ZGRF1Q86YA3 2104 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 CCDC88CQ9P219 2028 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 HIVEP1P15822 2718 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 A0A1B0GUH1 482 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 NDST3O95803 873 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 MT-CYBP00156 380 aaPredicted RBP16.16■□□□□ 0.18
CHMP3-203ENST00000409225 STSP08842 583 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 SLC35G4P0C7Q5 338 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 MSL3P1P0C860 447 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 PRDX3P30048 256 aaKnown RBP16.16■□□□□ 0.18
CHMP3-203ENST00000409225 AKT1P31749 480 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 SPAM1P38567 509 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 PRKCIP41743 596 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 TSFMP43897 325 aaKnown RBP16.16■□□□□ 0.18
CHMP3-203ENST00000409225 SOX8P57073 446 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 AP1B1Q10567 949 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 CDC16Q13042 620 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 NOMO1Q15155 1222 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 CDHR3Q6ZTQ4 885 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 TMEM151BQ8IW70 566 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 GPR135Q8IZ08 494 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 DDHD1Q8NEL9 900 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 OR2Y1Q8NGV0 311 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 LCN9Q8WX39 176 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 RMDN2Q96LZ7 410 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 SRPK1Q96SB4 655 aaKnown RBP16.16■□□□□ 0.18
CHMP3-203ENST00000409225 NRTNQ99748 197 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 C17orf62Q9BQA9 187 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 SLC25A51Q9H1U9 297 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 SRMSQ9H3Y6 488 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 AIPL1Q9NZN9 384 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 IFT80Q9P2H3 777 aaPredicted RBP16.16■□□□□ 0.18
CHMP3-203ENST00000409225 NDOR1Q9UHB4 597 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 ACSL5Q9ULC5 683 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 CDYLQ9Y232 598 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 COLEC10Q9Y6Z7 277 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 SVILO95425 2214 aa16.16■□□□□ 0.18
CHMP3-203ENST00000409225 ITPR3Q14573 2671 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 MGAT4DA6NG13 374 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 MATN2O00339 956 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 ALOX12BO75342 701 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 PMPCBO75439 489 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 POLBP06746 335 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 MSH3P20585 1137 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 NDUFS1P28331 727 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 HMGCLP35914 325 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 MYL5Q02045 173 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 ZNF169Q14929 603 aaPredicted RBP16.15■□□□□ 0.18
CHMP3-203ENST00000409225 PDK2Q15119 407 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 ZFYVE27Q5T4F4 411 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 MAP7D3Q8IWC1 876 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 N4BP2L2Q92802 583 aaPredicted RBP16.15■□□□□ 0.18
CHMP3-203ENST00000409225 TADA1Q96BN2 335 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 FAF2Q96CS3 445 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 DEF6Q9H4E7 631 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 UBP1Q9NZI7 540 aa16.15■□□□□ 0.18
CHMP3-203ENST00000409225 FER1L5A0AVI2 2057 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms