RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SLC30A1Q9Y6M5 507 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 ASXL3Q9C0F0 2248 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 HELZ2Q9BYK8 2649 aaKnown RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 FAM221BA6H8Z2 402 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 PRRT4C9JH25 899 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 K7EQS6 105 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 TRIM38O00635 465 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 AURKAO14965 403 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 CRCPO75575 148 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 CAPNS1P04632 268 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 SNRPB2P08579 225 aaKnown RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 F7P08709 466 aaPredicted RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 HNRNPLP14866 589 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 MZF1P28698 734 aaPredicted RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 CSKP41240 450 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 IL2P60568 153 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 RHOAP61586 193 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 CACNG1Q06432 222 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 TRAP1Q12931 704 aaKnown RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 GRIK2Q13002 908 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 FASTKQ14296 549 aaKnown RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 CRY1Q16526 586 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 UNC50Q53HI1 259 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 PITRM1Q5JRX3 1037 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 ARMC12Q5T9G4 340 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 SPATA19Q7Z5L4 167 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 KIAA0907Q7Z7F0 614 aaPredicted RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 ADIPOR2Q86V24 386 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 APCDD1Q8J025 514 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 AHI1Q8N157 1196 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 RYBPQ8N488 228 aaPredicted RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 SPATA6LQ8N4H0 392 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 PTGR2Q8N8N7 351 aaPredicted RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 DCAF4L2Q8NA75 395 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 LPCAT1Q8NF37 534 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 OR13C4Q8NGS5 318 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 WFIKKN2Q8TEU8 576 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 ANKRD49Q8WVL7 239 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 HMGB4Q8WW32 186 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 LPGAT1Q92604 370 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 ROPN1LQ96C74 230 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 CAMK1GQ96NX5 476 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 CDRT15Q96T59 188 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 ECSITQ9BQ95 431 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 FEM1AQ9BSK4 669 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 CIPCQ9C0C6 399 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 CYP4F12Q9HCS2 524 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 GEMIN8Q9NWZ8 242 aaKnown RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 SLC6A14Q9UN76 642 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 NDUFAF1Q9Y375 327 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 KCTD3Q9Y597 815 aa12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.37
SMARCB1-203ENST00000407082 PI4KAP42356 2102 aa12.71□□□□□ -0.38
SMARCB1-203ENST00000407082 A0A1W2PQ67 120 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 TTC24A2A3L6 582 aaPredicted RBP12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 VGLL3A8MV65 326 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 SUPT3HB4E1H0 165 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 E5RI56 91 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 AZIN1O14977 448 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 SNX2O60749 519 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 SUPT3HO75486 399 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 TMCC1O94876 653 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 KLF8O95600 359 aaPredicted RBP12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 S100BP04271 92 aaPredicted RBP12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 ENO3P13929 434 aaPredicted RBP12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 POLR2EP19388 210 aaKnown RBP12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 FMO4P31512 558 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 P2RY2P41231 377 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 PSMD8P48556 350 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 HSPA13P48723 471 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 PLK1P53350 603 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 TRIP6Q15654 476 aaKnown RBP12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 DUOXA1Q1HG43 343 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 MAP7D1Q3KQU3 841 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 PLEKHG6Q3KR16 790 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 FUT11Q495W5 492 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 TMEM215Q68D42 235 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 ZNF549Q6P9A3 640 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 SLC23A3Q6PIS1 610 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 TMEM92Q6UXU6 159 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 MINDY1Q8N5J2 469 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 RCN3Q96D15 328 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 C19orf60Q96EN9 201 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 LRGUKQ96M69 825 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 ATOH8Q96SQ7 321 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 EFHD1Q9BUP0 239 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 C1QTNF3Q9BXJ4 246 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 GPR63Q9BZJ6 419 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 SHCBP1LQ9BZQ2 653 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 SUDS3Q9H7L9 328 aaPredicted RBP12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 GID8Q9NWU2 228 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 ELOVL2Q9NXB9 296 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 APPL1Q9UKG1 709 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 INTS6Q9UL03 887 aaKnown RBP12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 MMP17Q9ULZ9 603 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 G3BP2Q9UN86 482 aaKnown RBP12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 OR51B4Q9Y5P0 310 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 OAS3Q9Y6K5 1087 aaKnown RBP12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 ADAMTS9Q9P2N4 1935 aa12.7□□□□□ -0.38
SMARCB1-203ENST00000407082 ACACAQ13085 2346 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms