RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 PTCD3Q96EY7 689 aaKnown RBP13.03□□□□□ -0.32
CEACAM1-206ENST00000403136 HIST1H2AHQ96KK5 128 aa13.03□□□□□ -0.32
CEACAM1-206ENST00000403136 HIST1H2AJQ99878 128 aa13.03□□□□□ -0.32
CEACAM1-206ENST00000403136 H2AFJQ9BTM1 129 aa13.03□□□□□ -0.32
CEACAM1-206ENST00000403136 CD244Q9BZW8 370 aa13.03□□□□□ -0.32
CEACAM1-206ENST00000403136 MEAF6Q9HAF1 191 aa13.03□□□□□ -0.32
CEACAM1-206ENST00000403136 MBNL1Q9NR56 388 aaKnown RBP13.03□□□□□ -0.32
CEACAM1-206ENST00000403136 TRIM33Q9UPN9 1127 aa13.03□□□□□ -0.32
CEACAM1-206ENST00000403136 A0A1B0GTL3 188 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 A0A1W2PQU0 124 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 PRR5-ARHGAP8B1AHC4 643 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 HNRNPCL1O60812 293 aaKnown RBP13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 SKAP2O75563 359 aaPredicted RBP13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 MATN4O95460 622 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 ESRRBO95718 433 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 PCCBP05166 539 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 HSPA7P48741 367 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 RASSF2P50749 326 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 ARHGAP8P85298 464 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 CDKL1Q00532 357 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 ABRQ12979 859 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 SP140Q13342 867 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 FGL2Q14314 439 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 TTC31Q49AM3 519 aaPredicted RBP13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 ZNF658BQ4V348 819 aaPredicted RBP13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 SYTL3Q4VX76 610 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 NXNQ6DKJ4 435 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 KIAA1161Q6NSJ0 714 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 METTL2BQ6P1Q9 378 aaKnown RBP13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 Q7L0L9 218 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 ASRGL1Q7L266 308 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 HEATR4Q86WZ0 1026 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 TRAPPC5Q8IUR0 188 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 CEP70Q8NHQ1 597 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 MCOLN3Q8TDD5 553 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 ACTRT2Q8TDY3 377 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 GLMNQ92990 594 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 KLHL29Q96CT2 875 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 SLC7A6OSQ96CW6 309 aaPredicted RBP13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 MRGPRX1Q96LB2 322 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 LINC00615Q96LM1 132 aaPredicted RBP13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 SLC17A9Q9BYT1 436 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 ARL15Q9NXU5 204 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 WWOXQ9NZC7 414 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 GULP1Q9UBP9 304 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 FAM8A1Q9UBU6 413 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 ZNF225Q9UK10 706 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 NCKAP1Q9Y2A7 1128 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 TMEM98Q9Y2Y6 226 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 DNAJC15Q9Y5T4 150 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 CAPN7Q9Y6W3 813 aa13.02□□□□□ -0.32
CEACAM1-206ENST00000403136 LRRK1Q38SD2 2015 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TBC1D3DA0A087WVF3 549 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TBC1D3IA0A087WXS9 549 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TBC1D3EA0A087X179 549 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TBC1D3KA0A087X1G2 549 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 C17orf113A0A1B0GUU1 675 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TBC1D3FA6NER0 549 aaPredicted RBP13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TBC1D3LB9A6J9 549 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 MYO1CO00159 1063 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 MAN2B1O00754 1011 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 RNGTTO60942 597 aaKnown RBP13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 POP7O75817 140 aaKnown RBP13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 GSTM1P09488 218 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TBC1D3HP0C7X1 549 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 ESRRAP11474 423 aaPredicted RBP13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 FOSL2P15408 326 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 AOC1P19801 751 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 CYP2A7P20853 494 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 CALB2P22676 271 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TEAD1P28347 426 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 PRDX3P30048 256 aaKnown RBP13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TRIM23P36406 574 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 ADPRHP54922 357 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 FOXA1P55317 472 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 PKNOX1P55347 436 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 CDK3Q00526 305 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 GSTM4Q03013 218 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 GTF2H2Q13888 395 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 INPP5AQ14642 412 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 RBBP7Q16576 425 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 MAP7D1Q3KQU3 841 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TMEM259Q4ZIN3 620 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 KANK2Q63ZY3 851 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TBC1D3GQ6DHY5 549 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TBC1D3CQ6IPX1 549 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 PTCRAQ6ISU1 281 aaPredicted RBP13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 GTF2H2CQ6P1K8 395 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 NEK5Q6P3R8 708 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TTC23LQ6PF05 361 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 USP30Q70CQ3 517 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 GOLGA7Q7Z5G4 137 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 SYVN1Q86TM6 617 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 KBTBD6Q86V97 674 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 ZNF547Q8IVP9 402 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 CFAP206Q8IYR0 622 aa13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 TBC1D3Q8IZP1 549 aaPredicted RBP13.02□□□□□ -0.33
CEACAM1-206ENST00000403136 LILRA3Q8N6C8 439 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms