RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 NUDT1P36639 197 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SSR2P43308 183 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 CXCL12P48061 93 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ARSDP51689 593 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 HERVK_113P63132 956 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SLC18A2Q05940 514 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 NAPRTQ6XQN6 538 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SLC36A4Q6YBV0 504 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 TRIM74Q86UV6 250 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SMPDL3AQ92484 453 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 C19orf60Q96EN9 201 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF778Q96MU6 729 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 MYADMQ96S97 322 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ERVK-6Q9BXR3 956 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 NUSAP1Q9BXS6 441 aaKnown RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 MARK1Q9P0L2 795 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ARMCX1Q9P291 453 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 KIF17Q9P2E2 1029 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SPO11Q9Y5K1 396 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SNX8Q9Y5X2 465 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 APBB3O95704 486 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 IGHA2P01877 340 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 CREB1P16220 341 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 CTHP32929 405 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 MAGEA9P43362 315 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 GPNMBQ14956 572 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 MLF2Q15773 248 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 NDUFA9Q16795 377 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ATP13A5Q4VNC0 1218 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 COL13A1Q5TAT6 717 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 KRT80Q6KB66 452 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 DCUN1D3Q8IWE4 304 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SIX5Q8N196 739 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 RHBGQ9H310 441 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 RC3H2Q9HBD1 1191 aaKnown RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 OXSMQ9NWU1 459 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 PCDH10Q9P2E7 1040 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 CIDEBQ9UHD4 219 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 DNAJC8O75937 253 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SERPINA6P08185 405 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 CCR2P41597 374 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 RGRP47804 291 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ATAD3BQ5T9A4 648 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 PSAPL1Q6NUJ1 521 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 PARS2Q7L3T8 475 aaKnown RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SPATA19Q7Z5L4 167 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 TMC8Q8IU68 726 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 CATSPER1Q8NEC5 780 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 OR2A12Q8NGT7 310 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 KCNV2Q8TDN2 545 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 TWIST2Q8WVJ9 160 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 EFCAB11Q9BUY7 163 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF358Q9NW07 568 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 THEGQ9P2T0 379 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 TRPC4Q9UBN4 977 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ZCWPW2A0A1B0GU75 182 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 CASQ2O14958 399 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 PROCP04070 461 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SLC35G6P0C7Q6 338 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ZNF37AP17032 561 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 HNRNPA2B1P22626 353 aaKnown RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SOX11P35716 441 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ADAM15Q13444 863 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 ELOCQ15369 112 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SNAP47Q5SQN1 464 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 EMC10Q5UCC4 262 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 METTL21CQ5VZV1 264 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 LRRC70Q7Z2Q7 622 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 SCUBE1Q8IWY4 988 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 KIAA1958Q8N8K9 716 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 OR2T34Q8NGX1 318 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 HCAR2Q8TDS4 363 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 TPSD1Q9BZJ3 242 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 LRTM1Q9HBL6 345 aa8.13□□□□□ -1.11
PTPRD-204ENST00000397606 NOP53Q9NZM5 478 aaKnown RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 THAP10Q9P2Z0 257 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-204ENST00000397606 B4DGG1 531 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 MYO1CO00159 1063 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 LINC01565O15544 149 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 OR1I1O60431 355 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 ABCB1P08183 1280 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 SNRPB2P08579 225 aaKnown RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 CD72P21854 359 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 ECHS1P30084 290 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 KRT20P35900 424 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 IL12RB1P42701 662 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 FBXO48Q5FWF7 155 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 SLC44A2Q8IWA5 706 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 DEFB107AQ8IZN7 70 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 DEFB119Q8N690 84 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 RIN3Q8TB24 985 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 CCDC28BQ9BUN5 200 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 SLC32A1Q9H598 525 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 LEF1Q9UJU2 399 aaPredicted RBP8.12□□□□□ -1.11
PTPRD-204ENST00000397606 GMEB2Q9UKD1 530 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 A0A0G2JMZ2 1700 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 PTPRFP10586 1907 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 OR5K4A6NMS3 321 aa8.12□□□□□ -1.11
PTPRD-204ENST00000397606 BHMG1C9JSJ3 638 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms