RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 TNFRSF11BO00300 401 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 SLC28A2O43868 658 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 PRKD3O94806 890 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 CDK14O94921 469 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 ANXA4P09525 319 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-204ENST00000397545 TFPTP0C1Z6 253 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 CDH12P55289 794 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 SLC10A2Q12908 348 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-204ENST00000397545 CRHR2Q13324 411 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 CCNIQ14094 377 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 SLC2A7Q6PXP3 512 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 TTC29Q8NA56 475 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-204ENST00000397545 ST13P5Q8NFI4 369 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-204ENST00000397545 SPPL2BQ8TCT7 592 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 UROC1Q96N76 676 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 GPR22Q99680 433 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 MCMBPQ9BTE3 642 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 RPRD1BQ9NQG5 326 aaKnown RBP10.61□□□□□ -0.71
CCDC40-204ENST00000397545 WBP11Q9Y2W2 641 aaKnown RBP10.61□□□□□ -0.71
CCDC40-204ENST00000397545 BRWD1Q9NSI6 2320 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 MYO7AQ13402 2215 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 A0A088AWK7 358 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 A0A1B0GW55 424 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 FAM72CH0Y354 149 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 INSIG1O15503 277 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 SORBS2O94875 1100 aaKnown RBP10.61□□□□□ -0.71
CCDC40-204ENST00000397545 DUX4L2P0CJ85 424 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 DUX4L3P0CJ86 424 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 DUX4L4P0CJ87 422 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 DUX4L5P0CJ88 424 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 DUX4L6P0CJ89 424 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 DUX4L7P0CJ90 424 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 T-ENOLP0DO92 83 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 GDF5P43026 501 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 ZNF132P52740 706 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 UGT2B15P54855 530 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 IL18R1Q13478 541 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 FAM72AQ5TYM5 149 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 CDCA2Q69YH5 1023 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-204ENST00000397545 FAM72DQ6L9T8 149 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 FAM131AQ6UXB0 335 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 OSTM1Q86WC4 334 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 FAM72BQ86X60 149 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 CLIP4Q8N3C7 705 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 BRI3BPQ8WY22 251 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 TOP1MTQ969P6 601 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 TAMM41Q96BW9 452 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 CDKN2AIPNLQ96HQ2 116 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 NARS2Q96I59 477 aaKnown RBP10.61□□□□□ -0.71
CCDC40-204ENST00000397545 FCRL3Q96P31 734 aaPredicted RBP10.61□□□□□ -0.71
CCDC40-204ENST00000397545 FNDC11Q9BVV2 318 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 C1orf21Q9H246 121 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 MARCH7Q9H992 704 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 EQTNQ9NQ60 294 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 TMLHEQ9NVH6 421 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 CMTM6Q9NX76 183 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 DUX4Q9UBX2 424 aa10.61□□□□□ -0.71
CCDC40-204ENST00000397545 COL1A2P08123 1366 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 DIO3P55073 304 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 UFM1P61960 85 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 HERVK_113P63132 956 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 TGM3Q08188 693 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 FAM20CQ8IXL6 584 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 TXNDC5Q8NBS9 432 aaKnown RBP10.6□□□□□ -0.71
CCDC40-204ENST00000397545 CLIP3Q96DZ5 547 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 TTPALQ9BTX7 342 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 ERVK-6Q9BXR3 956 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 NFKBIZQ9BYH8 718 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 GKN1Q9NS71 199 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 DNAJC11Q9NVH1 559 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 PMF1-BGLAPU3KQ54 211 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 FFAR2O15552 330 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 FAM189A1O60320 539 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 ACSL4O60488 711 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 TPST2O60704 377 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 FKTNO75072 461 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 UGT2B11O75310 529 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 AP2A2O94973 939 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 WARSP23381 471 aaKnown RBP10.6□□□□□ -0.71
CCDC40-204ENST00000397545 NTSP30990 170 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 ACVRL1P37023 503 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 IFNGR2P38484 337 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 C2orf80Q0P641 193 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 DAG1Q14118 895 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 PLET1Q6UQ28 207 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 ASRGL1Q7L266 308 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 ZBTB2Q8N680 514 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 TP53INP1Q96A56 240 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 KLHL32Q96NJ5 620 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 SUCOQ9UBS9 1254 aaKnown RBP10.6□□□□□ -0.71
CCDC40-204ENST00000397545 FAM240BA0A1B0GVZ2 78 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 AQP12BA6NM10 295 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 CASKO14936 926 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 ECI2O75521 394 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 IL7RP16871 459 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 MAPK8P45983 427 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 INHBEP58166 350 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 PURAQ00577 322 aaKnown RBP10.6□□□□□ -0.71
CCDC40-204ENST00000397545 MTAPQ13126 283 aa10.6□□□□□ -0.71
CCDC40-204ENST00000397545 USP41Q3LFD5 358 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms