RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 SLC35G2Q8TBE7 412 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 BLOC1S5Q8TDH9 187 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 LCN9Q8WX39 176 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 DCUN1D1Q96GG9 259 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 C5orf34Q96MH7 638 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 TLR10Q9BXR5 811 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 SRMSQ9H3Y6 488 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 TRHDEQ9UKU6 1024 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 B3GNT3Q9Y2A9 372 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 CFAP20Q9Y6A4 193 aaKnown RBP17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 AP1M2Q9Y6Q5 423 aa17.02■□□□□ 0.32
EXOSC3-202ENST00000396521 C17orf113A0A1B0GUU1 675 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 A1L4Q6 167 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 E7EQ34 232 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 CBX6O95503 412 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 PRAMEF1O95521 474 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 KRT1P04264 644 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 CAPN1P07384 714 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 POLR2CP19387 275 aaPredicted RBP17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 CD68P34810 354 aaPredicted RBP17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 ITGA1P56199 1179 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 WASHC5Q12768 1159 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 MRPL49Q13405 166 aaKnown RBP17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 ELOAQ14241 798 aaKnown RBP17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 SSPNQ14714 243 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 LYPLAL1Q5VWZ2 237 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 ZNF449Q6P9G9 518 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 FAM198BQ6UWH4 519 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 NPNTQ6UXI9 565 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 GPR135Q8IZ08 494 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 CLEC1AQ8NC01 280 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 OR4E2Q8NGC2 313 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 HM13Q8TCT9 377 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 MRGPRX2Q96LB1 330 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 FSD1LQ9BXM9 530 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 MFRPQ9BY79 579 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 PITPNM3Q9BZ71 974 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 DEF6Q9H4E7 631 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 KLHL8Q9P2G9 620 aaPredicted RBP17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 SHANK1Q9Y566 2161 aa17.01■□□□□ 0.31
EXOSC3-202ENST00000396521 C5orf60A6NFR6 353 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 A6NL46 340 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 TMEM150CB9EJG8 249 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 CFAP99D6REC4 459 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 PEX12O00623 359 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 SEC16AO15027 2179 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 LDLRP01130 860 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 GYPCP04921 128 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 TPM3P06753 285 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 NFKB1P19838 968 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 PBLDP30039 288 aaPredicted RBP17■□□□□ 0.31
EXOSC3-202ENST00000396521 PRDX3P30048 256 aaKnown RBP17■□□□□ 0.31
EXOSC3-202ENST00000396521 CD151P48509 253 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 ABRQ12979 859 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 MYBPC3Q14896 1274 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 ZNF789Q5FWF6 425 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 PID1Q7Z2X4 250 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 CFAP206Q8IYR0 622 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 SLC34A3Q8N130 599 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 SLC25A41Q8N5S1 370 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 TTC13Q8NBP0 860 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 SPDYE1Q8NFV5 336 aaPredicted RBP17■□□□□ 0.31
EXOSC3-202ENST00000396521 OR1L3Q8NH93 324 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 NACC2Q96BF6 587 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 ULK4Q96C45 1275 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 SNRNP40Q96DI7 357 aaKnown RBP17■□□□□ 0.31
EXOSC3-202ENST00000396521 FERMT1Q9BQL6 677 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 TFB2MQ9H5Q4 396 aaKnown RBP17■□□□□ 0.31
EXOSC3-202ENST00000396521 MVB12BQ9H7P6 319 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 VPS37BQ9H9H4 285 aa17■□□□□ 0.31
EXOSC3-202ENST00000396521 ZNHIT6Q9NWK9 470 aaKnown RBP17■□□□□ 0.31
EXOSC3-202ENST00000396521 MED13Q9UHV7 2174 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 HACD1B0YJ81 288 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 IFRD1O00458 451 aaPredicted RBP16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 GAPDHSO14556 408 aaPredicted RBP16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 GSTM1P09488 218 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 DCTP40126 519 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 SOX8P57073 446 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 DYNLT1P63172 113 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 GSTM4Q03013 218 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 ATP1A4Q13733 1029 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 TAF1AQ15573 450 aaPredicted RBP16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 TAZQ16635 292 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 LCN10Q6JVE6 187 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 SARM1Q6SZW1 724 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 TICAM1Q8IUC6 712 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 COG1Q8WTW3 980 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 P3H4Q92791 437 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 RNF25Q96BH1 459 aaPredicted RBP16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 PACSIN1Q9BY11 444 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 CHRNA10Q9GZZ6 450 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 ASB8Q9H765 288 aa16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 ERRFI1Q9UJM3 462 aaPredicted RBP16.99■□□□□ 0.31
EXOSC3-202ENST00000396521 CELSR2Q9HCU4 2923 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 GSAPA4D1B5 854 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 ANKUB1A6NFN9 424 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 AGAP14A8MT82 685 aa16.98■□□□□ 0.31
EXOSC3-202ENST00000396521 C2orf74A8MZ97 194 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms