RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 UBDO15205 165 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 ANXA5P08758 320 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 THRAP10827 490 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 PRDX3P30048 256 aaKnown RBP11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 CPOXP36551 454 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 HSPA7P48741 367 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 RPIAP49247 311 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 SEC13P55735 322 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 C2orf27AQ580R0 203 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 ZNF776Q68DI1 518 aaPredicted RBP11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 ARHGAP24Q8N264 748 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 TCAIMQ8N3R3 496 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 RP9Q8TA86 221 aaKnown RBP11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 GLMNQ92990 594 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 MCUR1Q96AQ8 359 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 ERLEC1Q96DZ1 483 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 LENG8Q96PV6 779 aaPredicted RBP11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 TRIM54Q9BYV2 358 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 NOL11Q9H8H0 719 aaKnown RBP11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 ST14Q9Y5Y6 855 aa11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 TNRC18O15417 2968 aaPredicted RBP11.22□□□□□ -0.61
SMARCAL1-203ENST00000392128 OR7A17O14581 309 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 VPS4BO75351 444 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 CHEK2O96017 543 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 OTCP00480 354 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 NTSR1P30989 418 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 GGT5P36269 586 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 ATP4BP51164 291 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 TAS2R38P59533 333 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 MXRA7P84157 204 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 SQLEQ14534 574 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 FAM219BQ5XKK7 198 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 TMEM220Q6QAJ8 160 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 RALGPS2Q86X27 583 aaPredicted RBP11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 PARP9Q8IXQ6 854 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 FAM13CQ8NE31 585 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 OR52B6Q8NGF0 335 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 OR2T3Q8NH03 318 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 MARK4Q96L34 752 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 CCT7Q99832 543 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 RTKNQ9BST9 563 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 AKTIPQ9H8T0 292 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 FBRSQ9HAH7 460 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 TRIM39Q9HCM9 518 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 PFDN4Q9NQP4 134 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 OPTCQ9UBM4 332 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 G3BP2Q9UN86 482 aaKnown RBP11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 ZFC3H1O60293 1989 aaKnown RBP11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 SLC5A10A0PJK1 596 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 TMEM202A6NGA9 273 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 K7EPI3 171 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 LILRB5O75023 590 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 MATN4O95460 622 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 HIST1H2AGP0C0S8 130 aaPredicted RBP11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 EZRP15311 586 aaKnown RBP11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 HIST1H2ADP20671 130 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 CYP2A7P20853 494 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 AP1S2P56377 157 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 ERVPABLB-1P60509 514 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 RPS14P62263 151 aaKnown RBP11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 AGERQ15109 404 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 ZNF658BQ4V348 819 aaPredicted RBP11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 ADGRG6Q86SQ4 1221 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 DDIASQ8IXT1 998 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 SKA2Q8WVK7 121 aaPredicted RBP11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 FAM131CQ96AQ9 280 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 TMEM159Q96B96 161 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 ZNF514Q96K75 400 aaPredicted RBP11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 HIST1H2AHQ96KK5 128 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 HIST1H2AJQ99878 128 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 H2AFJQ9BTM1 129 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 IPPKQ9H8X2 491 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 ARL15Q9NXU5 204 aa11.21□□□□□ -0.61
SMARCAL1-203ENST00000392128 SPTBN5Q9NRC6 3674 aaKnown RBP11.21□□□□□ -0.62
SMARCAL1-203ENST00000392128 TRPM6Q9BX84 2022 aa11.21□□□□□ -0.62
SMARCAL1-203ENST00000392128 LOC100653049A0A140TA62 436 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 ATP6AP2A0A1C7CYW4 349 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 GRXCR2A6NFK2 248 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 C2CD4DB7Z1M9 353 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 CCNT2O60583 730 aaKnown RBP11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 ATP6AP2O75787 350 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 KRT34O76011 436 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 TM7SF2O76062 418 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 OR4F21O95013 312 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 GSTM1P09488 218 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 IGFBP4P22692 258 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 MAPK9P45984 424 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 PIK3CGP48736 1102 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 HNMTP50135 292 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 IRX1P78414 480 aaPredicted RBP11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 GSTM4Q03013 218 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 TRAF3Q13114 568 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 CYLC2Q14093 348 aaPredicted RBP11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 TTC31Q49AM3 519 aaPredicted RBP11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 SYTL3Q4VX76 610 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 XKR7Q5GH72 579 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 TMEM196Q5HYL7 178 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 SDE2Q6IQ49 451 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 LETMD1Q6P1Q0 360 aa11.2□□□□□ -0.62
SMARCAL1-203ENST00000392128 ADAMTSL4Q6UY14 1074 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1002.6 ms