RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ZNF285Q96NJ3 590 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 NECTIN4Q96NY8 510 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 SDHCQ99643 169 aaPredicted RBP0.42□□□□□ -2.34
SNORD28-201ENST00000384706 REEP2Q9BRK0 252 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 TDRD1Q9BXT4 1180 aaKnown RBP0.42□□□□□ -2.34
SNORD28-201ENST00000384706 TEX13BQ9BXU2 312 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 YTHDF1Q9BYJ9 559 aaKnown RBP0.42□□□□□ -2.34
SNORD28-201ENST00000384706 TMEM39BQ9GZU3 492 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF700Q9H0M5 742 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 RAB6CQ9H0N0 254 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 PIGMQ9H3S5 423 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 DENND2DQ9H6A0 471 aaPredicted RBP0.42□□□□□ -2.34
SNORD28-201ENST00000384706 PDFQ9HBH1 243 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 MBNL1Q9NR56 388 aaKnown RBP0.42□□□□□ -2.34
SNORD28-201ENST00000384706 ASAH2Q9NR71 780 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 RASSF1Q9NS23 344 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 TNFRSF19Q9NS68 423 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 SLC6A13Q9NSD5 602 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 MIOSQ9NXC5 875 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 HCN3Q9P1Z3 774 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 HAO1Q9UJM8 370 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 IKZF3Q9UKT9 509 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 HSF4Q9ULV5 492 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF510Q9Y2H8 683 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 STYXL1Q9Y6J8 313 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 KIF25-AS1Q9Y6Z4 181 aa0.42□□□□□ -2.34
SNORD28-201ENST00000384706 FAM205AQ6ZU69 1335 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 LOC101059948A0A1B0GTJ6 334 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ABHD14A-ACY1A0A1B0GW23 586 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 A0A1W2PRB8 838 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 GAGE10A6NGK3 116 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 C15orf61A6NNL5 157 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 FAM220BPB1ANY3 271 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 EIF3CLB5ME19 914 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 PI4K2BG5E9Z4 385 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 TAF4O00268 1085 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF217O75362 1048 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 PRKRAO75569 313 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 SLCO2B1O94956 709 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 CCNDBP1O95273 360 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 LY6G6DO95868 133 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 IGHEP01854 428 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ICAM1P05362 532 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 HOXB5P09067 269 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 THEGLP0DJG4 465 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ATP6V1B1P15313 513 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 VEGFAP15692 232 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 EFNA1P20827 205 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 LHCGRP22888 699 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 CHKAP35790 457 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 GGT5P36269 586 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 PIP4K2AP48426 406 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 LMAN1P49257 510 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 PAPOLAP51003 745 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 CLCN4P51793 760 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 NEXNQ0ZGT2 675 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF79Q15937 498 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 CDONQ4KMG0 1287 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 C2orf83Q53S99 150 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 PRR30Q53SZ7 412 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF805Q5CZA5 627 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 HERC4Q5GLZ8 1057 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 CXorf66Q5JRM2 361 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 RSBN1Q5VWQ0 802 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 LYSMD4Q5XG99 296 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ATG16L1Q676U5 607 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 TSSK4Q6SA08 328 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 KIF6Q6ZMV9 814 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 CDHR3Q6ZTQ4 885 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF534Q76KX8 674 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 BTN2A1Q7KYR7 527 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 LRRC8DQ7L1W4 858 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 TIPARPQ7Z3E1 657 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 HAUS6Q7Z4H7 955 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 OR4N5Q8IXE1 308 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 PRR22Q8IZ63 422 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 KIRREL3Q8IZU9 778 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 MARVELD2Q8N4S9 558 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 C11orf42Q8N5U0 333 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 MYCT1Q8N699 235 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 MAPKAPK5-AS1Q8N8E1 139 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 SLC38A9Q8NBW4 561 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 VPS37AQ8NEZ2 397 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 OR10G8Q8NGN5 311 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 OR6S1Q8NH40 331 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 C11orf45Q8TAV5 145 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 GSDMBQ8TAX9 411 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ZCCHC10Q8TBK6 192 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 MAPK15Q8TD08 544 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 TRAPPC12Q8WVT3 735 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 PSPC1Q8WXF1 523 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 DAZLQ92904 295 aaKnown RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ATXN7L3BQ96GX2 97 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 C1orf147Q96MC9 270 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 UBAC1Q9BSL1 405 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 PITPNM3Q9BZ71 974 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 TUBB1Q9H4B7 451 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 PRKRIP1Q9H875 184 aaPredicted RBP0.41□□□□□ -2.34
SNORD28-201ENST00000384706 ARNT2Q9HBZ2 717 aa0.41□□□□□ -2.34
SNORD28-201ENST00000384706 GPN1Q9HCN4 374 aaPredicted RBP0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms