RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 DIO3P55073 304 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 SRP54P61011 504 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 RPS21P63220 83 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 MRPS9P82933 396 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ACY1Q03154 408 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 TNP2Q05952 138 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 GOLGA8FQ08AF8 430 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 GOLGA8DPQ0D2H9 430 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 FLIIQ13045 1269 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 GPS2Q13227 327 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ITGADQ13349 1161 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 TUBB3Q13509 450 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 RFTN1Q14699 578 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ICAM4Q14773 271 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 DDR2Q16832 855 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 LGALS9BQ3B8N2 356 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 PLA2G4EQ3MJ16 856 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 LDLRAP1Q5SW96 308 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZNF648Q5T619 568 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 C9orf64Q5T6V5 341 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 AGAP9Q5VTM2 703 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 RTL6Q6ICC9 239 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 OVOS1Q6IE37 1185 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 LCN10Q6JVE6 187 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 HIBCHQ6NVY1 386 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 MIS18BP1Q6P0N0 1132 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZNF836Q6ZNA1 936 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 GALNTL5Q7Z4T8 443 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 KIAA1328Q86T90 577 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ADAMTSL2Q86TH1 951 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 NDUFA11Q86Y39 141 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 CDKL3Q8IVW4 592 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 FTSJ3Q8IY81 847 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 BCL6BQ8N143 479 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 STK11IPQ8N1F8 1099 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 SIRT6Q8N6T7 355 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 GVQW1Q8N7I0 195 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 RASGEF1AQ8N9B8 481 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 SIDT2Q8NBJ9 832 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 POGLUT1Q8NBL1 392 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 STKLD1Q8NE28 680 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 NFAM1Q8NET5 270 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 OR4M2Q8NGB6 313 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 OR2Y1Q8NGV0 311 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 DCAF4Q8WV16 495 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 HOXB13Q92826 284 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 PLPPR2Q96GM1 343 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 PIWIL1Q96J94 861 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 C9orf72Q96LT7 481 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 C10orf90Q96M02 699 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 GNRHR2Q96P88 292 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZNF385AQ96PM9 386 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 FAM111AQ96PZ2 611 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 CDK15Q96Q40 435 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 DPH2Q9BQC3 489 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 TRAF4Q9BUZ4 470 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 KRTAP4-7Q9BYR0 210 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 SLC2A11Q9BYW1 496 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 BPESC1Q9GZL8 116 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZNF700Q9H0M5 742 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 DEFB127Q9H1M4 99 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 C16orf95Q9H693 158 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ASB8Q9H765 288 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 MINDY3Q9H8M7 445 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 TMEM8AQ9HCN3 771 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 SARS2Q9NP81 518 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 INPP5EQ9NRR6 644 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 GPR27Q9NS67 375 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 SIRT3Q9NTG7 399 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZDHHC18Q9NUE0 388 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 PLEK2Q9NYT0 353 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 CTTNBP2NLQ9P2B4 639 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ORC3Q9UBD5 711 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ARPP21Q9UBL0 812 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 FBLN5Q9UBX5 448 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZNF69Q9UC07 566 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 NOL12Q9UGY1 213 aaKnown RBP eCLIP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 TSR3Q9UJK0 312 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ANAPC7Q9UJX3 599 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 LSM7Q9UK45 103 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 POU2F3Q9UKI9 436 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ERVW-1Q9UQF0 538 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 SIK3Q9Y2K2 1263 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 UTP18Q9Y5J1 556 aaKnown RBP eCLIP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 LIPGQ9Y5X9 500 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 GPC6Q9Y625 555 aaPredicted RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 PMF1-BGLAPU3KQ54 211 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 LPAP08519 4548 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 TNXBP22105 4242 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 PHF3Q92576 2039 aaKnown RBP0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 EVPLQ92817 2033 aa0.93□□□□□ -2.26
RNU6-42P-201ENST00000384165 ZNF840PA6NDX5 716 aa0.92□□□□□ -2.26
RNU6-42P-201ENST00000384165 A8MUI8 341 aa0.92□□□□□ -2.26
RNU6-42P-201ENST00000384165 KCNU1A8MYU2 1149 aa0.92□□□□□ -2.26
RNU6-42P-201ENST00000384165 C16orf97H3BN30 126 aa0.92□□□□□ -2.26
RNU6-42P-201ENST00000384165 TOR1BO14657 336 aa0.92□□□□□ -2.26
RNU6-42P-201ENST00000384165 PTGESO14684 152 aa0.92□□□□□ -2.26
RNU6-42P-201ENST00000384165 EPHB6O15197 1021 aa0.92□□□□□ -2.26
RNU6-42P-201ENST00000384165 SGSM2O43147 1006 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms