RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 RBM48Q5RL73 367 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-204ENST00000380756 TRIM48Q8IWZ4 208 aa12.53□□□□□ -0.4
DNMT3A-204ENST00000380756 DPP10Q8N608 796 aa12.53□□□□□ -0.4
DNMT3A-204ENST00000380756 SUSD3Q96L08 255 aa12.53□□□□□ -0.4
DNMT3A-204ENST00000380756 ACAT2Q9BWD1 397 aa12.53□□□□□ -0.4
DNMT3A-204ENST00000380756 ATP6V1HQ9UI12 483 aa12.53□□□□□ -0.4
DNMT3A-204ENST00000380756 SSR3Q9UNL2 185 aa12.53□□□□□ -0.4
DNMT3A-204ENST00000380756 ENTPD4Q9Y227 616 aa12.53□□□□□ -0.4
DNMT3A-204ENST00000380756 SAGE2PA6NJ88 616 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 CNTN5O94779 1100 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 MYCLP1P12525 358 aaPredicted RBP12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 PCSK2P16519 638 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 CXCR2P25025 360 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 GABRR2P28476 465 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 NOS3P29474 1203 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 ATP4BP51164 291 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 SCAPQ12770 1279 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 ATXN7L2Q5T6C5 722 aaPredicted RBP12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 TAMM41Q96BW9 452 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 CHCHD6Q9BRQ6 235 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 ZNF696Q9H7X3 374 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 TMEM9Q9P0T7 183 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 ADAMTS5Q9UNA0 930 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 PLCH1Q4KWH8 1693 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 KRT87PA6NCN2 255 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 MAGEB17A8MXT2 336 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 TFECO14948 347 aaPredicted RBP12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 ZBTB48P10074 688 aaPredicted RBP12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 EFNA1P20827 205 aaPredicted RBP12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 PRMT2P55345 433 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 KCNA10Q16322 511 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 C14orf80Q86SX3 495 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 TMPRSS11BQ86T26 416 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 CACUL1Q86Y37 369 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 ZZZ3Q8IYH5 903 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 KDM1BQ8NB78 822 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 KLHL23Q8NBE8 558 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 PIH1D2Q8WWB5 315 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 SORT1Q99523 831 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 KLHL1Q9NR64 748 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 CCM2LQ9NUG4 571 aaPredicted RBP12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 SLC9A8Q9Y2E8 581 aa12.52□□□□□ -0.4
DNMT3A-204ENST00000380756 PLK4O00444 970 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 ADAMDEC1O15204 470 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 CDK14O94921 469 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 NTSP30990 170 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 LEPRP48357 1165 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 CCL23P55773 120 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 ZNF792Q3KQV3 632 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 OR52E8Q6IFG1 317 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 FAR1Q8WVX9 515 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 KBTBD7Q8WVZ9 684 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 ARNTL2Q8WYA1 636 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 TIFAQ96CG3 184 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 EBPLQ9BY08 206 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 DERL2Q9GZP9 239 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 GIN1Q9NXP7 522 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 TNFRSF21O75509 655 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 SERPINB7O75635 380 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 FEN1P39748 380 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 GPR1P46091 355 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 MS4A2Q01362 244 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 ZNF829Q3KNS6 432 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 SPRYD7Q5W111 196 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 C10orf53Q8N6V4 93 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 EEF1AKMT1Q8WVE0 214 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 COPS4Q9BT78 406 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 TNKS2Q9H2K2 1166 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 AMBNQ9NP70 447 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 RGS17Q9UGC6 210 aaPredicted RBP12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 WBP11Q9Y2W2 641 aaKnown RBP12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 TESMINQ9Y4I5 508 aa12.52□□□□□ -0.41
DNMT3A-204ENST00000380756 G6PDP11413 515 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 NSG1P42857 185 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 ALDH3A2P51648 485 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 RAET1GQ6H3X3 334 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 CAPN13Q6MZZ7 669 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 MZT2BQ6NZ67 158 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 DEF8Q6ZN54 512 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 PRR23BQ6ZRT6 265 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 SLC15A3Q8IY34 581 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 DNAJB8Q8NHS0 232 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 TSPEARQ8WU66 669 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 MRGPRX2Q96LB1 330 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 TEFMQ96QE5 360 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 TCF25Q9BQ70 676 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 CORO1BQ9BR76 489 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 DNAAF2Q9NVR5 837 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 LYVE1Q9Y5Y7 322 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 A0A0U1RQF3 1178 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 PRORSD1PA6NEY8 169 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 CCDC182A6NF36 153 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 GUCY1B2O75343 617 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 SNAI1O95863 264 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 EPOP01588 193 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 FMO3P31513 532 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 SRSF11Q05519 484 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 SDE2Q6IQ49 451 aa12.51□□□□□ -0.41
DNMT3A-204ENST00000380756 GPR153Q6NV75 609 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms