RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 NPLOC4Q8TAT6 608 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 REXO5Q96IC2 774 aaKnown RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 UBXN10Q96LJ8 280 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 RIPOR3Q96MK2 946 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 KCNA7Q96RP8 456 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 KCNS3Q9BQ31 491 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 TBCDQ9BTW9 1192 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 FSD1LQ9BXM9 530 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 SYTL2Q9HCH5 934 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 FBXL12Q9NXK8 326 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 MAP3K20Q9NYL2 800 aaKnown RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 POLG2Q9UHN1 485 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 SIX4Q9UIU6 781 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 PCDHB14Q9Y5E9 798 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 FOCADQ5VW36 1801 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 TSPAN4O14817 238 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 TNFRSF21O75509 655 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 OR7A10O76100 309 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 ARHGEF15O94989 841 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 SIX3O95343 332 aaPredicted RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 ERCC2P18074 760 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 GADD45AP24522 165 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 AZGP1P25311 298 aaKnown RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 DNAJB2P25686 324 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 ERP29P30040 261 aaKnown RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 SLC35A2P78381 396 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 GHRHRQ02643 423 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 EMX2Q04743 252 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 PRKG2Q13237 762 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 GALNT3Q14435 633 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 TIGD6Q17RP2 521 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 GPAT3Q53EU6 434 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 ESCO2Q56NI9 601 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 FKBP1CQ5VVH2 108 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 ABHD15Q6UXT9 468 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 SPNS2Q8IVW8 549 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 TRIM48Q8IWZ4 208 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 CACTIN-AS1Q8N1I8 211 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 FNDC5Q8NAU1 212 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 TP53I13Q8NBR0 393 aaPredicted RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 MTMR14Q8NCE2 650 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 OR52K2Q8NGK3 314 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 OR6P1Q8NGX9 317 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 TSPEARQ8WU66 669 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 DEDD2Q8WXF8 326 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 ZBED3Q96IU2 234 aaPredicted RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 SLC30A2Q9BRI3 323 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 KIFC1Q9BW19 673 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 UCK2Q9BZX2 261 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 ROGDIQ9GZN7 287 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 DYRK4Q9NR20 520 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 TMPRSS4Q9NRS4 437 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 IGSF5Q9NSI5 407 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 NAALAD2Q9Y3Q0 740 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 EFCAB10A6NFE3 127 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 LACTBL1A8MY62 500 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 M0QYT0 321 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 NCAM2O15394 837 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 PSMD3O43242 534 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 MSCO60682 206 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 PLA2G6O60733 806 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 TIE1P35590 1138 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 PPP3CCP48454 512 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 MASP1P48740 699 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 PRIM2P49643 509 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 HUNKP57058 714 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 HERVK_113P63132 956 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 FADDQ13158 208 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 DDR2Q16832 855 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 VARS2Q5ST30 1063 aaKnown RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 GPR158Q5T848 1215 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 XRRA1Q6P2D8 792 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 ENPP6Q6UWR7 440 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 DET1Q7L5Y6 550 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 SPATA19Q7Z5L4 167 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 DEFB106AQ8N104 65 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 SLC39A13Q96H72 371 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 NEDD4LQ96PU5 975 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 MLPHQ9BV36 600 aaPredicted RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 ERVK-6Q9BXR3 956 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 SEMA4BQ9NPR2 832 aaPredicted RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 PRDM8Q9NQV8 689 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 PCDH10Q9P2E7 1040 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 FZD10Q9ULW2 581 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 ABT1Q9ULW3 272 aaKnown RBP7.18□□□□□ -1.26
TRIM6-202ENST00000380097 LOXHD1Q8IVV2 1947 aa7.18□□□□□ -1.26
TRIM6-202ENST00000380097 BRCA2P51587 3418 aa7.17□□□□□ -1.26
TRIM6-202ENST00000380097 POLR2AP24928 1970 aaKnown RBP7.17□□□□□ -1.26
TRIM6-202ENST00000380097 DFFAO00273 331 aa7.17□□□□□ -1.26
TRIM6-202ENST00000380097 PLK4O00444 970 aa7.17□□□□□ -1.26
TRIM6-202ENST00000380097 PPP6CO00743 305 aa7.17□□□□□ -1.26
TRIM6-202ENST00000380097 CAPN5O15484 640 aaPredicted RBP7.17□□□□□ -1.26
TRIM6-202ENST00000380097 MITFO75030 526 aaPredicted RBP7.17□□□□□ -1.26
TRIM6-202ENST00000380097 EEDO75530 441 aaKnown RBP7.17□□□□□ -1.26
TRIM6-202ENST00000380097 CDK14O94921 469 aa7.17□□□□□ -1.26
TRIM6-202ENST00000380097 SNX4O95219 450 aa7.17□□□□□ -1.26
TRIM6-202ENST00000380097 CYP2C18P33260 490 aa7.17□□□□□ -1.26
TRIM6-202ENST00000380097 UGT2B10P36537 528 aa7.17□□□□□ -1.26
TRIM6-202ENST00000380097 TKTL1P51854 596 aa7.17□□□□□ -1.26
TRIM6-202ENST00000380097 FOXA1P55317 472 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms