RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 FIGNQ5HY92 759 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 MLIPQ5VWP3 458 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 ZDHHC20Q5W0Z9 365 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 HPS6Q86YV9 775 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 LILRA3Q8N6C8 439 aaPredicted RBP17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 IPMKQ8NFU5 416 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 SYN2Q92777 582 aaPredicted RBP17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 OLFM3Q96PB7 478 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 GBP4Q96PP9 640 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 RANBP9Q96S59 729 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 XPO4Q9C0E2 1151 aaKnown RBP17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 SRMSQ9H3Y6 488 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 TRABDQ9H4I3 376 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 IL17CQ9P0M4 197 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 POMT2Q9UKY4 750 aa17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 DNMT3AQ9Y6K1 912 aaPredicted RBP17.28■□□□□ 0.36
PDLIM4-202ENST00000379018 A0A1W2PQJ5 194 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 PRAMEF1O95521 474 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 H2AFZP0C0S5 128 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 ST6GAL1P15907 406 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 TNFRSF8P28908 595 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 CD68P34810 354 aaPredicted RBP17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 SLC9A5Q14940 896 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 C1orf189Q5VU69 101 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 LYPLAL1Q5VWZ2 237 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 KDELC1Q6UW63 502 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 CLEC17AQ6ZS10 378 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 H2AFVQ71UI9 128 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 MRGPREQ86SM8 312 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 CFAP206Q8IYR0 622 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 LCN9Q8WX39 176 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 TEKT5Q96M29 485 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 BPIFA3Q9BQP9 254 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 C1GALT1Q9NS00 363 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 KLHL8Q9P2G9 620 aaPredicted RBP17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 SAE1Q9UBE0 346 aaPredicted RBP17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 B3GNT3Q9Y2A9 372 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 PADI2Q9Y2J8 665 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 COLEC10Q9Y6Z7 277 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 LRBAP50851 2863 aa17.27■□□□□ 0.36
PDLIM4-202ENST00000379018 FER1L5A0AVI2 2057 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 WIPF3A6NGB9 483 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 C3orf70A6NLC5 250 aaPredicted RBP17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 E7EQ34 232 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 GOLGA6L22H0YM25 854 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 GAPDHSO14556 408 aaPredicted RBP17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 STX7O15400 261 aaKnown RBP17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 MAP3K7O43318 606 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 ZNF749O43361 778 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 ZFXP17010 805 aaPredicted RBP17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 AGXTP21549 392 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 NDUFS1P28331 727 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 FOXL2P58012 376 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 ZBED6P86452 979 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 ADCY2Q08462 1091 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 DEFB110Q30KQ9 67 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 ZNF789Q5FWF6 425 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 C1QL3Q5VWW1 255 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 TTC13Q8NBP0 860 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 CLEC1AQ8NC01 280 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 OR2L2Q8NH16 312 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 ZNF398Q8TD17 642 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 N4BP2L2Q92802 583 aaPredicted RBP17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 FERD3LQ96RJ6 166 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 GPN3Q9UHW5 284 aaPredicted RBP17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 SERTAD3Q9UJW9 196 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 ACSL5Q9ULC5 683 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 PTRH2Q9Y3E5 179 aaKnown RBP17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 COPG1Q9Y678 874 aaKnown RBP17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 ARL5AQ9Y689 179 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 CROCCQ5TZA2 2017 aa17.26■□□□□ 0.35
PDLIM4-202ENST00000379018 LOC285095A0A1B0GVY8 99 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 ARHGAP10A1A4S6 786 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 BTN3A1O00481 513 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 ALPPP05187 535 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 SLC1A5Q15758 541 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 KAZNQ674X7 775 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 CARFQ8N187 725 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 GALNT16Q8N428 558 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 TFB1MQ8WVM0 346 aaKnown RBP17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 RBM41Q96IZ5 413 aaKnown RBP17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 MRGPRX2Q96LB1 330 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 XKR8Q9H6D3 395 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 ASB8Q9H765 288 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 HACD3Q9P035 362 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 TMEM63CQ9P1W3 806 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 C5AR2Q9P296 337 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 SRPK3Q9UPE1 567 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 LUC7L2Q9Y383 392 aaKnown RBP17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 HYOU1Q9Y4L1 999 aa17.25■□□□□ 0.35
PDLIM4-202ENST00000379018 ABCA12Q86UK0 2595 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 BTN3A3O00478 584 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 PEX12O00623 359 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 CBSLP0DN79 551 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 PRDX3P30048 256 aaKnown RBP17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 CBSP35520 551 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 FOLR3P41439 243 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 FANCCQ00597 558 aa17.24■□□□□ 0.35
PDLIM4-202ENST00000379018 PRKD1Q15139 912 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms