RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CYP2S1Q96SQ9 504 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 SDCBP2Q9H190 292 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 CHRAC1Q9NRG0 131 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 SEMA3GQ9NS98 782 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 TRAFD1O14545 582 aaPredicted RBP10.67□□□□□ -0.7
HIF3A-205ENST00000377670 OR6B1O95007 311 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 GIMD1P0DJR0 217 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 POLD2P49005 469 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 SEPHS1P49903 392 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 ADAM17P78536 824 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 TAPT1Q6NXT6 567 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 TMPRSS11BQ86T26 416 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 SLITRK2Q9H156 845 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 EXD2Q9NVH0 621 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 FFAR3O14843 346 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 GPR42O15529 346 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 ZNF217O75362 1048 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 LTA4HP09960 611 aaKnown RBP10.67□□□□□ -0.7
HIF3A-205ENST00000377670 DPP6P42658 865 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 IL18R1Q13478 541 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 FGL2Q14314 439 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 GALNT18Q6P9A2 607 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 GCNT7Q6ZNI0 430 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 HFE2Q6ZVN8 426 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 TRABD2AQ86V40 505 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 SATL1Q86VE3 508 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 HPS6Q86YV9 775 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 IQCKQ8N0W5 287 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 ZNF461Q8TAF7 563 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 R3HDMLQ9H3Y0 253 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 ANKHQ9HCJ1 492 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 CLN6Q9NWW5 311 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 CMTM6Q9NX76 183 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 MTRRQ9UBK8 725 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 BTRCQ9Y297 605 aa10.67□□□□□ -0.7
HIF3A-205ENST00000377670 SHOX2O60902 331 aaPredicted RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 TYRP14679 529 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 HTR7P34969 479 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 DRG2P55039 364 aaKnown RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 ATXN7L2Q5T6C5 722 aaPredicted RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 PTCRAQ6ISU1 281 aaPredicted RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 RHBDF2Q6PJF5 856 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 EIF3MQ7L2H7 374 aaKnown RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 CLNKQ7Z7G1 428 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 SPOCK2Q92563 424 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 MCMBPQ9BTE3 642 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 CDADC1Q9BWV3 514 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 OR2AG1Q9H205 316 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 LMAN1LQ9HAT1 526 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 ING3Q9NXR8 418 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 ZNF221Q9UK13 617 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 OGDHLQ9ULD0 1010 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 PRPF19Q9UMS4 504 aaKnown RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 RBM7Q9Y580 266 aaKnown RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 WNT9AO14904 365 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 VEGFDO43915 354 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 CREB1P16220 341 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 FAM187BQ17R55 369 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 ZFP69Q49AA0 526 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 INTS11Q5TA45 600 aaKnown RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 STRADAQ7RTN6 431 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 PROSER1Q86XN7 944 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 FITM2Q8N6M3 262 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 SMARCD2Q92925 531 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 HNRNPABQ99729 332 aaKnown RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 AARSD1Q9BTE6 412 aaKnown RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 ADAMTS10Q9H324 1103 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 ZNF576Q9H609 170 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 CCDC177Q9NQR7 707 aaPredicted RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 LYVE1Q9Y5Y7 322 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 PMF1-BGLAPU3KQ54 211 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 MYH1P12882 1939 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 ATP6AP2A0A1C7CYW4 349 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 HEPACAM2A8MVW5 462 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 LOC110117498-PIK3R3F6TDL0 507 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 BIRC5O15392 142 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 ATP6AP2O75787 350 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 STAT5AP42229 794 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 BNIP2Q12982 314 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 SLC36A4Q6YBV0 504 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 PCDH19Q8TAB3 1148 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 LINGO1Q96FE5 620 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 VPS35Q96QK1 796 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 CRISPLD1Q9H336 500 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 HCN2Q9UL51 889 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 GNEQ9Y223 722 aaKnown RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 B3GALT2O43825 422 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 FADS2O95864 444 aaKnown RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 NTRK1P04629 796 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 SCNN1AP37088 669 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 DPYSQ14117 519 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 GDPD4Q6W3E5 623 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 AZIN2Q96A70 460 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 SGK2Q9HBY8 427 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 LEF1Q9UJU2 399 aaPredicted RBP10.66□□□□□ -0.7
HIF3A-205ENST00000377670 HAT1O14929 419 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 ULK1O75385 1050 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 TRAPPC6AO75865 159 aa10.66□□□□□ -0.7
HIF3A-205ENST00000377670 HNRNPLP14866 589 aaKnown RBP eCLIP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms