RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 EXOSC8Q96B26 276 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 SCRN2Q96FV2 425 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 SEPHS2Q99611 448 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 INTS10Q9NVR2 710 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 CLEC4EQ9ULY5 219 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 NPIPB15A6NHN6 443 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 C2CD4DB7Z1M9 353 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 HDAC3O15379 428 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 GPR39O43194 453 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 CAPN1P07384 714 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 KRT16P08779 473 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 PFKLP17858 780 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 PRKAA2P54646 552 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 ZNF33AQ06730 810 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 FLOT2Q14254 428 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 MPP7Q5T2T1 576 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 PSAPL1Q6NUJ1 521 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 IGDCC3Q8IVU1 814 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 CPXM2Q8N436 756 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 WFDC5Q8TCV5 224 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 ATOH1Q92858 354 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 SIGLEC10Q96LC7 697 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 RERGLQ9H628 205 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 MAGEE1Q9HCI5 957 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 VTI1BQ9UEU0 232 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 CCT8L1PA6NM43 557 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 A8MUA0 341 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 MRASO14807 208 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 CLDN9O95484 217 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 EGFP01133 1207 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 TGFB1P01137 390 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 ENO2P09104 434 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 HOXA9P31269 272 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 SMAD4Q13485 552 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 MRPL58Q14197 206 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 MAPKAPK3Q16644 382 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 RALGPS1Q5JS13 557 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 Q6ZSR6 202 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 IQCKQ8N0W5 287 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 UBR7Q8N806 425 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 DNAJB14Q8TBM8 379 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 RBM18Q96H35 190 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 TPD52L3Q96J77 140 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 PLEKHA8Q96JA3 519 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 CNPPD1Q9BV87 410 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 MRGBPQ9NV56 204 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 ALKBH4Q9NXW9 302 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 COPG2Q9UBF2 871 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 RPS6KB2Q9UBS0 482 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 ANGPTL2Q9UKU9 493 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 AK5Q9Y6K8 562 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 PIPSLA2A3N6 862 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 HHLA1C9JL84 531 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 STC1P52823 247 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 MANFP55145 182 aaKnown RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 RAB8AP61006 207 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 CLCQ05315 142 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 KLF1Q13351 362 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 NDUFA9Q16795 377 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 DNAL1Q4LDG9 190 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 LYSMD4Q5XG99 296 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 TSSK4Q6SA08 328 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 DEFB107AQ8IZN7 70 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 DNAJC5GQ8N7S2 189 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 SLC39A13Q96H72 371 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 PRICKLE1Q96MT3 831 aaPredicted RBP8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 IL17FQ96PD4 163 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 GAL3ST4Q96RP7 486 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 FAM83CQ9BQN1 747 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 CEP44Q9C0F1 390 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 GPR34Q9UPC5 381 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 NME7Q9Y5B8 376 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 SPO11Q9Y5K1 396 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 ZNF780BQ9Y6R6 833 aa8.32□□□□□ -1.08
CRNKL1-202ENST00000377340 OCM2P0CE71 109 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 OCMP0CE72 109 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 HNRNPA2B1P22626 353 aaKnown RBP8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 OXTRP30559 389 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 HNRNPKP61978 463 aaKnown RBP eCLIP8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 MEF2AQ02078 507 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 SLC13A2Q13183 592 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 TCTN1Q2MV58 587 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 TEDDM1Q5T9Z0 273 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 PRPF38BQ5VTL8 546 aaKnown RBP8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 MED27Q6P2C8 311 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 PARS2Q7L3T8 475 aaKnown RBP8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 GALNT4Q8N4A0 578 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 FBXO15Q8NCQ5 510 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 CNDP1Q96KN2 507 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 PPP3R2Q96LZ3 170 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 GATA5Q9BWX5 397 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 EBPLQ9BY08 206 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 MTMR10Q9NXD2 777 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 MARCH4Q9P2E8 410 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 GALPQ9UBC7 116 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 PLLPQ9Y342 182 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 POLR3HQ9Y535 204 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 RREB1Q92766 1687 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 AURKAO14965 403 aa8.31□□□□□ -1.08
CRNKL1-202ENST00000377340 CCNDBP1O95273 360 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms