RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 SLC13A3Q8WWT9 602 aa16.13■□□□□ 0.17
SDC4-201ENST00000372733 FAM162AQ96A26 154 aa16.13■□□□□ 0.17
SDC4-201ENST00000372733 ITPKCQ96DU7 683 aa16.13■□□□□ 0.17
SDC4-201ENST00000372733 BTN2A3PQ96KV6 586 aa16.13■□□□□ 0.17
SDC4-201ENST00000372733 RBM4BQ9BQ04 359 aaKnown RBP16.13■□□□□ 0.17
SDC4-201ENST00000372733 KATNAL1Q9BW62 490 aa16.13■□□□□ 0.17
SDC4-201ENST00000372733 RBM4Q9BWF3 364 aaKnown RBP16.13■□□□□ 0.17
SDC4-201ENST00000372733 AP5M1Q9H0R1 490 aa16.13■□□□□ 0.17
SDC4-201ENST00000372733 HMG20AQ9NP66 347 aa16.13■□□□□ 0.17
SDC4-201ENST00000372733 USE1Q9NZ43 259 aa16.13■□□□□ 0.17
SDC4-201ENST00000372733 FKBPLQ9UIM3 349 aa16.13■□□□□ 0.17
SDC4-201ENST00000372733 RIMKLBQ9ULI2 386 aa16.13■□□□□ 0.17
SDC4-201ENST00000372733 LOC100130705A0A1B0GUX0 176 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 MYADML2A6NDP7 307 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 NDUFS2O75306 463 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 UGT2B11O75310 529 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 E2F6O75461 281 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 JRKO75564 520 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 FSHRP23945 695 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 ISL1P61371 349 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 PURAQ00577 322 aaKnown RBP16.12■□□□□ 0.17
SDC4-201ENST00000372733 GTDC1Q4AE62 458 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 PRR23BQ6ZRT6 265 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 ANKRD13BQ86YJ7 626 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 TTC9BQ8N6N2 239 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 OR4F6Q8NGB9 312 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 NDNFQ8TB73 568 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 SLC35B4Q969S0 331 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 NCLNQ969V3 563 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 SUSD3Q96L08 255 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 GORASP2Q9H8Y8 452 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 PDFQ9HBH1 243 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 FBXO10Q9UK96 956 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 CD52P31358 61 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 PIK3CGP48736 1102 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 TUSC3Q13454 348 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 FAM174BQ3ZCQ3 159 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 GOLGA7Q7Z5G4 137 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 MSRB3Q8IXL7 192 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 OR10Q1Q8NGQ4 319 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 BPIFA1Q9NP55 256 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 DNMT3BQ9UBC3 853 aaKnown RBP16.12■□□□□ 0.17
SDC4-201ENST00000372733 AASSQ9UDR5 926 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 NAALAD2Q9Y3Q0 740 aa16.12■□□□□ 0.17
SDC4-201ENST00000372733 OR7A17O14581 309 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 GPR182O15218 404 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 UGT2B4P06133 528 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 GGT5P36269 586 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 DCTP40126 519 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 TMED10P49755 219 aaKnown RBP16.11■□□□□ 0.17
SDC4-201ENST00000372733 EPS8Q12929 822 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 KIAA0040Q15053 153 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 ZNF691Q5VV52 312 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 MRPL10Q7Z7H8 261 aaKnown RBP16.11■□□□□ 0.17
SDC4-201ENST00000372733 PHACTR4Q8IZ21 702 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 SVOPLQ8N434 492 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 OR7D4Q8NG98 312 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 FAR1Q8WVX9 515 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 GTF2H4Q92759 462 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 RHBDF1Q96CC6 855 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 ATAD3AQ9NVI7 634 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 TMEM45AQ9NWC5 275 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 SLC25A37Q9NYZ2 338 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 ZMYM5Q9UJ78 669 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 SLC12A8A0AV02 714 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 ZNF99A8MXY4 864 aaPredicted RBP16.11■□□□□ 0.17
SDC4-201ENST00000372733 CXCR6O00574 342 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 B4GALT3O60512 393 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 TSPAN3O60637 253 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 MITFO75030 526 aaPredicted RBP16.11■□□□□ 0.17
SDC4-201ENST00000372733 SLC2A4P14672 509 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 MC4RP32245 332 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 NADSYN1Q6IA69 706 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 TTC30BQ8N4P2 665 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 EFHBQ8N7U6 833 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 HEPHQ9BQS7 1158 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 WDR12Q9GZL7 423 aaKnown RBP16.11■□□□□ 0.17
SDC4-201ENST00000372733 ATP13A3Q9H7F0 1226 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 MARCH2Q9P0N8 246 aa16.11■□□□□ 0.17
SDC4-201ENST00000372733 DOCK3Q8IZD9 2030 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 DRGXA6NNA5 263 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 E5RI56 91 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 AQP9O43315 295 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 GABARAPO95166 117 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 PFKLP17858 780 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 HOXD9P28356 352 aaPredicted RBP16.1■□□□□ 0.17
SDC4-201ENST00000372733 MAP2K4P45985 399 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 IL5RAQ01344 420 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 EMX1Q04741 257 aaPredicted RBP16.1■□□□□ 0.17
SDC4-201ENST00000372733 DNASE1L3Q13609 305 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 TRIP4Q15650 581 aaPredicted RBP16.1■□□□□ 0.17
SDC4-201ENST00000372733 ADPRMQ3LIE5 342 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 ZRANB3Q5FWF4 1079 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 C10orf120Q5SQS8 335 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 FRA10AC1Q70Z53 315 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 CADM3Q8N126 398 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 LPCAT1Q8NF37 534 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 OR7A2PQ8NGA2 310 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 GIPC2Q8TF65 315 aa16.1■□□□□ 0.17
SDC4-201ENST00000372733 ALOXE3Q9BYJ1 711 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms