RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 HPCAL1P37235 193 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 HCAR3P49019 387 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 ETV1P50549 477 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 CDKL1Q00532 357 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 POU4F2Q12837 409 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 MSLNQ13421 630 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-206ENST00000367253 CUL2Q13617 745 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 TNFAIP8L3Q5GJ75 292 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 ERMARDQ5T6L9 678 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 ATG9BQ674R7 924 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 C3orf33Q6P1S2 294 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 RIPOR1Q6ZS17 1223 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 MSANTD1Q6ZTZ1 278 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 C17orf64Q86WR6 236 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 TOP6BLQ8N6T0 577 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 CDYL2Q8N8U2 506 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 CA5BP1Q8WTZ4 195 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 PTGES2Q9H7Z7 377 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 TCF7L2Q9NQB0 619 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 GNPTGQ9UJJ9 305 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 CYP26A1O43174 497 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 MATN4O95460 622 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 HLA-DQA2P01906 255 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 PROCP04070 461 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 SAMD4BQ5PRF9 694 aaKnown RBP8.53□□□□□ -1.04
SYNE1-206ENST00000367253 MPP7Q5T2T1 576 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 POMZP3Q6PJE2 187 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 MARVELD2Q8N4S9 558 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 KBTBD7Q8WVZ9 684 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 AP3S1Q92572 193 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 PLD4Q96BZ4 506 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 CSPG4P5Q96PW8 444 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 ZNF700Q9H0M5 742 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 POPDC2Q9HBU9 364 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 GKN1Q9NS71 199 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 TMPRSS11EQ9UL52 423 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 ALG5Q9Y673 324 aa8.53□□□□□ -1.04
SYNE1-206ENST00000367253 ASTN2O75129 1339 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-206ENST00000367253 MMP13P45452 471 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 UCNP55089 124 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 INO80DQ53TQ3 878 aaPredicted RBP8.52□□□□□ -1.04
SYNE1-206ENST00000367253 ARHGAP40Q5TG30 622 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 DRICH1Q6PGQ1 229 aaPredicted RBP8.52□□□□□ -1.04
SYNE1-206ENST00000367253 FBXW8Q8N3Y1 598 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 FSTL5Q8N475 847 aaPredicted RBP8.52□□□□□ -1.04
SYNE1-206ENST00000367253 ANKFN1Q8N957 763 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 OR4K17Q8NGC6 315 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 FAXDC2Q96IV6 333 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 RNF145Q96MT1 663 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 CITED1Q99966 193 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 RNF39Q9H2S5 420 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 TMEM134Q9H6X4 195 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 ANKZF1Q9H8Y5 726 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 FBXL12Q9NXK8 326 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 SLC24A2Q9UI40 661 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 ATRNO75882 1429 aa8.52□□□□□ -1.04
SYNE1-206ENST00000367253 CIB4A0PJX0 185 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 EFCAB7A8K855 629 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 NUPL2O15504 423 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 RPP40O75818 363 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 BPNT1O95861 308 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 COMTP21964 271 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 MAGEA12P43365 314 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 CDH15P55291 814 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 CSHL1Q14406 222 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ENPP7Q6UWV6 458 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 UNC5DQ6UXZ4 953 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ARPINQ7Z6K5 226 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ZC3HC1Q86WB0 502 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 LIX1LQ8IVB5 337 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 MEIOBQ8N635 442 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 SMYD1Q8NB12 490 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 OR5T1Q8NG75 326 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 STOML3Q8TAV4 291 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 SPPL2AQ8TCT8 520 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 PIK3R3Q92569 461 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ANAPC16Q96DE5 110 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ZNF354BQ96LW1 612 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 CHCHD6Q9BRQ6 235 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 STOX2Q9P2F5 926 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 KCNE2Q9Y6J6 123 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 NCANO14594 1321 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 BTN3A1O00481 513 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 CPNE3O75131 537 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 TGM6O95932 706 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 CHRNA1P02708 482 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 HSD17B2P37059 387 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 CASP9P55211 416 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 PTSQ03393 145 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 GRB10Q13322 594 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 IL18R1Q13478 541 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 GALNTL6Q49A17 601 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ESCO2Q56NI9 601 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 RTL10Q7L3V2 364 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 METTL16Q86W50 562 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 DCP2Q8IU60 420 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ASCC1Q8N9N2 400 aaKnown RBP8.52□□□□□ -1.05
SYNE1-206ENST00000367253 FAM174AQ8TBP5 190 aa8.52□□□□□ -1.05
SYNE1-206ENST00000367253 ZNF845Q96IR2 970 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms